RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 KLK12Q9UKR0 248 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 TMEM131LA2VDJ0 1609 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 PZPP20742 1482 aa2.96□□□□□ -1.93
HMGB1P13-201ENST00000406019 NAIPQ13075 1403 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 TRAV38-1A0A0B4J264 116 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 PGPA6NDG6 321 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 EEF1E1-BLOC1S5C9J1V9 151 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 C9JAW5 83 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 E7EQ34 232 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 INMT-MINDY4F8WBC2 141 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 RPL36A-HNRNPH2H7BZ11 118 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 EEF1E1O43324 174 aaKnown RBP2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 SLC37A4O43826 429 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 PDCD6O75340 191 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 CA2P00918 260 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 HBZP02008 142 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 PSMB9P28065 219 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 S100A2P29034 98 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 FOXA1P55317 472 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 NCS1P62166 190 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 PRDX1Q06830 199 aaKnown RBP2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF816Q0VGE8 651 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF846Q147U1 533 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 SP6Q3SY56 376 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 MORN2Q502X0 79 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 Q5XG85 94 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 GOLT1AQ6ZVE7 132 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR2T27Q8NH04 317 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 MCFD2Q8NI22 146 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZC2HC1AQ96GY0 325 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 CARD19Q96LW7 228 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 LINC00167Q96N53 147 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 GPER1Q99527 375 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 PSMG3Q9BT73 122 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 HES4Q9HCC6 221 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 ACER3Q9NUN7 267 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 BOKQ9UMX3 212 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 HIGD1AQ9Y241 93 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 V9GYS6 101 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 LRRIQ1Q96JM4 1722 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 PRXQ9BXM0 1461 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 MLH3Q9UHC1 1453 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 KIAA1671Q9BY89 1806 aa2.96□□□□□ -1.94
HMGB1P13-201ENST00000406019 MYH7P12883 1935 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 OVOS2A0A0G2JMS6 1433 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 PLCH2O75038 1416 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 MYH10P35580 1976 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 LGALS9O00182 355 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 SOX14O95416 240 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 IFNA7P01567 189 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 TTRP02766 147 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 MRPL3P09001 348 aaKnown RBP2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 SPNP16150 400 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 MYL12AP19105 171 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 CCL23P55773 120 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 RPS28P62857 69 aaKnown RBP2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 SLC38A11Q08AI6 406 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 IHHQ14623 411 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 SSX1Q16384 188 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 BATFQ16520 125 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 MESTQ5EB52 335 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 TNFAIP8L2Q6P589 184 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 ARPINQ7Z6K5 226 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 PDPNQ86YL7 162 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 TCTEX1D1Q8N7M0 179 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 C5orf17Q8NAS9 161 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 LCN9Q8WX39 176 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 ISOC1Q96CN7 298 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 ANAPC13Q9BS18 74 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR2D2Q9H210 308 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 TAF9BQ9HBM6 251 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 GPR84Q9NQS5 396 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 SAR1AQ9NR31 198 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 LYRM2Q9NU23 88 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 TUBGCP6Q96RT7 1819 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 DENND4BO75064 1496 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 BCL9LQ86UU0 1499 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 FYCO1Q9BQS8 1478 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 FANCD2Q9BXW9 1451 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 BAZ2AQ9UIF9 1905 aaKnown RBP2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 INO80Q9ULG1 1556 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 CASZ1Q86V15 1759 aa2.95□□□□□ -1.94
HMGB1P13-201ENST00000406019 HECW1Q76N89 1606 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 BORCS7-ASMTA0A0B4J1R7 106 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 DUXBA0A1W2PPF3 345 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 hADV38S2A0JD32 116 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 FAM183AA6NL82 134 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 CCDC179H3BU77 68 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 EDF1O60869 148 aaKnown RBP2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 SMIM17P0DL12 118 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 LINC00694P0DN24 101 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 CD99P14209 185 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 NTF3P20783 257 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 CMPK1P30085 196 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 AGTR1P30556 359 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 G6PCP35575 357 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 SLC35A2P78381 396 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 DCDP81605 110 aaKnown RBP2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 GNA12Q03113 381 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 ATP5G2Q06055 141 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms