RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SSX2Q16385 188 aa20.98■□□□□ 0.95
COL13A1-203ENST00000398969 VHLLQ6RSH7 139 aa20.98■□□□□ 0.95
COL13A1-203ENST00000398969 TMEM256Q8N2U0 113 aa20.98■□□□□ 0.95
COL13A1-203ENST00000398969 MBD3L2Q8NHZ7 208 aaPredicted RBP20.98■□□□□ 0.95
COL13A1-203ENST00000398969 MYOD1P15172 320 aa20.98■□□□□ 0.95
COL13A1-203ENST00000398969 GLRXP35754 106 aa20.98■□□□□ 0.95
COL13A1-203ENST00000398969 MRPS11P82912 194 aaKnown RBP20.98■□□□□ 0.95
COL13A1-203ENST00000398969 DUX4L9Q6RFH8 374 aaPredicted RBP20.98■□□□□ 0.95
COL13A1-203ENST00000398969 C11orf52Q96A22 123 aa20.98■□□□□ 0.95
COL13A1-203ENST00000398969 SPTBN2O15020 2390 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 K7EN84 100 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 IGFBP2P18065 325 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 PRR20EP86478 221 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 PRR20CP86479 221 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 PRR20DP86480 221 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 PRR20BP86481 221 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 PRR20AP86496 221 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 IQCJQ1A5X6 159 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 LYG1Q8N1E2 194 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 MT-CO2P00403 227 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 ADMP35318 185 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 FAM222BQ8WU58 562 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 NDUFAF3Q9BU61 184 aa20.97■□□□□ 0.95
COL13A1-203ENST00000398969 K7EM74 188 aa20.96■□□□□ 0.95
COL13A1-203ENST00000398969 OR4A8P0C604 315 aa20.96■□□□□ 0.95
COL13A1-203ENST00000398969 TIMM23BQ5SRD1 257 aa20.96■□□□□ 0.95
COL13A1-203ENST00000398969 ZNF439Q8NDP4 499 aa20.96■□□□□ 0.95
COL13A1-203ENST00000398969 OR4P4Q8NGL7 312 aa20.96■□□□□ 0.95
COL13A1-203ENST00000398969 NEUROG1Q92886 237 aa20.96■□□□□ 0.95
COL13A1-203ENST00000398969 DCHS1Q96JQ0 3298 aa20.96■□□□□ 0.95
COL13A1-203ENST00000398969 TRGV10A0A0A0MS01 117 aa20.95■□□□□ 0.95
COL13A1-203ENST00000398969 NUPR1O60356 82 aa20.95■□□□□ 0.95
COL13A1-203ENST00000398969 POU2AF1Q16633 256 aa20.95■□□□□ 0.95
COL13A1-203ENST00000398969 HLA-DRB5Q30154 266 aa20.95■□□□□ 0.95
COL13A1-203ENST00000398969 ZNF474Q6S9Z5 364 aaPredicted RBP20.95■□□□□ 0.95
COL13A1-203ENST00000398969 ADTRPQ96IZ2 230 aa20.95■□□□□ 0.95
COL13A1-203ENST00000398969 HINT2Q9BX68 163 aa20.95■□□□□ 0.95
COL13A1-203ENST00000398969 OR51B2Q9Y5P1 312 aa20.95■□□□□ 0.95
COL13A1-203ENST00000398969 MGAQ8IWI9 3026 aa20.95■□□□□ 0.94
COL13A1-203ENST00000398969 FOXC1Q12948 553 aa20.95■□□□□ 0.94
COL13A1-203ENST00000398969 RBMXL3Q8N7X1 1067 aaKnown RBP20.95■□□□□ 0.94
COL13A1-203ENST00000398969 IL36BQ9NZH7 164 aa20.95■□□□□ 0.94
COL13A1-203ENST00000398969 SVILO95425 2214 aa20.95■□□□□ 0.94
COL13A1-203ENST00000398969 BOD1L1Q8NFC6 3051 aa20.95■□□□□ 0.94
COL13A1-203ENST00000398969 DSCAMO60469 2012 aa20.95■□□□□ 0.94
COL13A1-203ENST00000398969 IGLV3-9A0A075B6K5 115 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 C9JCJ5 164 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 LINC00869P0C866 280 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 GATA4P43694 442 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 UHRF2Q96PU4 802 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 FNDC10F2Z333 226 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 ZNF90Q03938 601 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 MIR17HGQ75NE6 70 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 BEND2Q8NDZ0 799 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 ZCCHC14Q8WYQ9 949 aaKnown RBP20.94■□□□□ 0.94
COL13A1-203ENST00000398969 FKBP11Q9NYL4 201 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 DSCAML1Q8TD84 2053 aa20.94■□□□□ 0.94
COL13A1-203ENST00000398969 SLC17A3O00476 420 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 LBHQ53QV2 105 aaPredicted RBP20.93■□□□□ 0.94
COL13A1-203ENST00000398969 STUMQ69YW2 141 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 CORO2AQ92828 525 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 C2orf88Q9BSF0 95 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 SFXN3Q9BWM7 321 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 RNF7Q9UBF6 113 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 LY96Q9Y6Y9 160 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 TRAV9-1A0A075B6T8 112 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 SNRPCP09234 159 aaKnown RBP20.93■□□□□ 0.94
COL13A1-203ENST00000398969 AREGP15514 252 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 GNG10P50151 68 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 MISP3Q96FF7 219 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 EAF1Q96JC9 268 aaPredicted RBP20.93■□□□□ 0.94
COL13A1-203ENST00000398969 PRNDQ9UKY0 176 aa20.93■□□□□ 0.94
COL13A1-203ENST00000398969 RAB4BP61018 213 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 SSTP61278 116 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 GCM1Q9NP62 436 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 TP53TG5Q9Y2B4 290 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 ACTL6BO94805 426 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 CBLN1P23435 193 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 TAS2R60P59551 318 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 FAM122AQ96E09 287 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 GAFA1Q96PS6 74 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 PLEKHA3Q9HB20 300 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 SLC25A10Q9UBX3 287 aaPredicted RBP20.92■□□□□ 0.94
COL13A1-203ENST00000398969 SLC45A2Q9UMX9 530 aa20.92■□□□□ 0.94
COL13A1-203ENST00000398969 J3QR06 171 aa20.91■□□□□ 0.94
COL13A1-203ENST00000398969 SCGB1D1O95968 90 aa20.91■□□□□ 0.94
COL13A1-203ENST00000398969 RNF224P0DH78 156 aa20.91■□□□□ 0.94
COL13A1-203ENST00000398969 SELENOTP62341 195 aa20.91■□□□□ 0.94
COL13A1-203ENST00000398969 ZNF257Q9Y2Q1 563 aa20.91■□□□□ 0.94
COL13A1-203ENST00000398969 TANC2Q9HCD6 1990 aa20.91■□□□□ 0.94
COL13A1-203ENST00000398969 GRIFINA4D1Z8 144 aa20.9■□□□□ 0.94
COL13A1-203ENST00000398969 PRCDQ00LT1 54 aa20.9■□□□□ 0.94
COL13A1-203ENST00000398969 DEFB108BQ8NET1 73 aa20.9■□□□□ 0.94
COL13A1-203ENST00000398969 SSUH2Q9Y2M2 353 aa20.9■□□□□ 0.94
COL13A1-203ENST00000398969 UPK2O00526 184 aa20.9■□□□□ 0.94
COL13A1-203ENST00000398969 MMP23AO75900 390 aa20.9■□□□□ 0.94
COL13A1-203ENST00000398969 NDUFB7P17568 137 aa20.9■□□□□ 0.94
COL13A1-203ENST00000398969 NABP2Q9BQ15 211 aa20.9■□□□□ 0.94
COL13A1-203ENST00000398969 SCNM1Q9BWG6 230 aa20.9■□□□□ 0.94
COL13A1-203ENST00000398969 ARL2-SNX15V9GYD0 113 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms