RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 EDDM3AQ14507 147 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 PSG3Q16557 428 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 RBMXL3Q8N7X1 1067 aaKnown RBP9.19□□□□□ -0.94
USP6NL-202ENST00000379237 FLVCR1-AS1Q8TAF5 88 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 IGHV5-51A0A0C4DH38 117 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 LOC389332A0A1B0GUA5 103 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 HIGD1CA8MV81 97 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 SLC25A17O43808 307 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 ANOS1P23352 680 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 YPEL5P62699 121 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 SRYQ05066 204 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 CD300EQ496F6 205 aaPredicted RBP9.19□□□□□ -0.94
USP6NL-202ENST00000379237 ANAPC13Q9BS18 74 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 COMMD5Q9GZQ3 224 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 MS4A6AQ9H2W1 248 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 KBTBD11-OT1A0A1B0GTJ5 212 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 SLC25A5P05141 298 aaKnown RBP9.19□□□□□ -0.94
USP6NL-202ENST00000379237 TIMM23BQ5SRD1 257 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 WDR82Q6UXN9 313 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 ABHD12Q8N2K0 398 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 CT55Q8WUE5 264 aa9.19□□□□□ -0.94
USP6NL-202ENST00000379237 TRBV20OR9-2A0A075B6H5 130 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 SYNGR1O43759 233 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 P01737 135 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 SRFP11831 508 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 REG1AP05451 166 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 STAG3L2P0CL84 134 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 SRD5A2P31213 254 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 LINC00310P59036 64 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 GUSBP1Q15486 140 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 PNRC2Q9NPJ4 139 aaKnown RBP9.18□□□□□ -0.94
USP6NL-202ENST00000379237 PLXNA2O75051 1894 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 TRGV10A0A0A0MS01 117 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 CDIPTO14735 213 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 SPINT2O43291 252 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 IGHV3-13P01766 116 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 IGHV3-7P01780 117 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 TMEM177Q53S58 311 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 PLXDC1Q8IUK5 500 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 MS4A5Q9H3V2 200 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 AP5S1Q9NUS5 200 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 SS18L2Q9UHA2 77 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 V9GYV3 84 aa9.18□□□□□ -0.94
USP6NL-202ENST00000379237 KLF7O75840 302 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-202ENST00000379237 HBBP68871 147 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 MRAP2Q96G30 205 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 TMEM140Q9NV12 185 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 WDR90Q96KV7 1748 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 PCNX3Q9H6A9 2034 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 EP300Q09472 2414 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-202ENST00000379237 SAA2-SAA4A0A096LPE2 208 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 C19orf67A6NJJ6 358 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 C9JCJ5 164 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 H3BRM9 83 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 K7EN84 100 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 CT45A6P0DMU7 189 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 CT45A5P0DMU8 189 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 CT45A7P0DMV0 189 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 OPRK1P41145 380 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 TBR1Q16650 682 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 CT45A1Q5HYN5 189 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 SPATA31B1PQ5VZV4 182 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 CT45A3Q8NHU0 189 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 RARRES3Q9UL19 164 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 WDR83OSQ9Y284 106 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 COX7A2P2O60397 106 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 MRPL33O75394 65 aaKnown RBP9.17□□□□□ -0.94
USP6NL-202ENST00000379237 ZNF138P52744 262 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 NHP2Q9NX24 153 aaKnown RBP9.17□□□□□ -0.94
USP6NL-202ENST00000379237 MMP17Q9ULZ9 603 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 SVILO95425 2214 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 VCANP13611 3396 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 H0YJW9 148 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 IGKV3-11P04433 115 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 CYC1P08574 325 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 GNG3P63215 75 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 MIR17HGQ75NE6 70 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 OR4F17Q8NGA8 305 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 UNC80Q8N2C7 3258 aa9.17□□□□□ -0.94
USP6NL-202ENST00000379237 CACNA1EQ15878 2313 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A10PA6NDY2 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A18PA6NE21 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A16PA6NEW6 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A20PA6NIJ5 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A8PA6NJQ4 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A7PA6NKC0 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A22PA8MWA6 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 A8MWL6 223 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A12PA8MX19 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A5PA8MXJ8 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A23PA8MXZ1 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 AHRRA9YTQ3 701 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A15PP0C7V4 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A13PP0C7W8 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A14PP0C7W9 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM90A24PP0C7X0 464 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 ETDBQ3ZM63 59 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FAM27BQ5VT28 67 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms