RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 UNQ5815/PRO19632Q6UWF5 114 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 WDR86Q86TI4 376 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 OR2T10Q8NGZ9 312 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 GOSR1O95249 250 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 NCMAPQ5T1S8 102 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 OR5AU1Q8NGC0 362 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 CHODLQ9H9P2 273 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 DBX1A6NMT0 343 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 C1QTNF9BB2RNN3 333 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 IGLV1-44P01699 117 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 C1QTNF9P0C862 333 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 ATP5IP56385 69 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-202ENST00000377797 PQLC2Q6ZP29 291 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 HIGD1AQ9Y241 93 aa12.04□□□□□ -0.48
TCOF1-202ENST00000377797 WIPF3A6NGB9 483 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 SAA1P0DJI8 122 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-202ENST00000377797 ANOS1P23352 680 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 COMPP49747 757 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-202ENST00000377797 ZNF525Q8N782 197 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 RBM14Q96PK6 669 aaKnown RBP12.03□□□□□ -0.48
TCOF1-202ENST00000377797 IGKV1-6A0A0C4DH72 117 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 NDUFB4O95168 129 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 HOXA4Q00056 320 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-202ENST00000377797 ZNF880Q6PDB4 577 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 HEPN1Q6WQI6 88 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 C16orf82Q7Z2V1 217 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 FAM168AQ92567 244 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 E7EQL1 145 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 GRAMD2BQ96HH9 432 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 LOC105371267A0A1B0GV96 52 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 ZNF273Q14593 569 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 P2RX4Q99571 388 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 NPCDR1Q9BY65 106 aa12.03□□□□□ -0.48
TCOF1-202ENST00000377797 YLPM1P49750 1951 aaKnown RBP12.03□□□□□ -0.48
TCOF1-202ENST00000377797 NTF3P20783 257 aa12.02□□□□□ -0.48
TCOF1-202ENST00000377797 LINC00469Q8N7U9 141 aa12.02□□□□□ -0.48
TCOF1-202ENST00000377797 OR10D4PQ8NGN7 298 aa12.02□□□□□ -0.48
TCOF1-202ENST00000377797 NABP2Q9BQ15 211 aa12.02□□□□□ -0.48
TCOF1-202ENST00000377797 DNAJC4Q9NNZ3 241 aa12.02□□□□□ -0.48
TCOF1-202ENST00000377797 TRAPPC1Q9Y5R8 145 aa12.02□□□□□ -0.48
TCOF1-202ENST00000377797 CD55P08174 381 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 NMSQ5H8A3 153 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 FAM209BQ5JX69 171 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 MEOX2P50222 304 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 TFF3Q07654 80 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 ZNF788Q6ZQV5 615 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 STPG3Q8N7X2 389 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 MBNL3Q9NUK0 354 aaKnown RBP12.02□□□□□ -0.49
TCOF1-202ENST00000377797 ZNF586Q9NXT0 402 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 IGKV1D-33P01593 117 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 IGKV1-33P01594 117 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 OR4A5Q8NH83 315 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 TMPRSS5Q9H3S3 457 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 NAT8BQ9UHF3 227 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 DOPEY2Q9Y3R5 2298 aa12.02□□□□□ -0.49
TCOF1-202ENST00000377797 SERTM2A0A1B0GWG4 89 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 LY6HO94772 140 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 IGKV1-5P01602 117 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 G0S2P27469 103 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 TCL1AP56279 114 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 TMEM200BQ69YZ2 307 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 DKK4Q9UBT3 224 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 IGKV3-7A0A075B6H7 116 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 UPK2O00526 184 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 OR9G9P0C7N8 305 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 ARL14EPLP0DKL9 152 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 FABP4P15090 132 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 GAFA1Q96PS6 74 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 FAM103A1Q9BTL3 118 aaKnown RBP12.01□□□□□ -0.49
TCOF1-202ENST00000377797 ANAPC10Q9UM13 185 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 LY6EQ16553 131 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 FAM74A7A6NL05 159 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 LINC00205P59089 165 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 LDLRAD3Q86YD5 345 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 SIGLECL1Q8N7X8 197 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 ANAPC16Q96DE5 110 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 IFI27L2Q9H2X8 130 aa12.01□□□□□ -0.49
TCOF1-202ENST00000377797 WISP2O76076 250 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 C8orf88P0DMB2 117 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 C15orf61A6NNL5 157 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 NPIPB11E5RHQ5 1161 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 ERVK11-1P61568 191 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 SPOCK3Q9BQ16 436 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 GGACTQ9BVM4 153 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 HSPB7Q9UBY9 170 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 DOCK11Q5JSL3 2073 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 NOTCH3Q9UM47 2321 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 LMO1P25800 156 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 TXNDC17Q9BRA2 123 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 LIME1Q9H400 295 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 PF4V1P10720 104 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 RAB5AP20339 215 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 BMI1P35226 326 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 SSX7Q7RTT5 188 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 DCAF16Q9NXF7 216 aa12□□□□□ -0.49
TCOF1-202ENST00000377797 MFAP4P55083 255 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 OR5R1Q8NH85 324 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 DPF1Q92782 380 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 MARVELD3Q96A59 401 aa11.99□□□□□ -0.49
TCOF1-202ENST00000377797 PITPNC1Q9UKF7 332 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms