RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 MAP1LC3BQ9GZQ8 125 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 RBKSQ9H477 322 aa10.1□□□□□ -0.79
VRK3-202ENST00000377011 ANK2Q01484 3957 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 LRRC30A6NM36 301 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 C22orf46C9J442 243 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 C12orf77C9JDV5 145 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 TMEM250H0YL14 139 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST1H2BKO60814 126 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 YIF1AO95070 293 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST1H2BJP06899 126 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST1H2BOP23527 126 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST1H2BBP33778 126 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 CEBPGP53567 150 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST1H2BDP58876 126 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 ERVFRD-1P60508 538 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 RAB11AP62491 216 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST1H2BCP62807 126 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST2H2BEQ16778 126 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 VWC2Q2TAL6 325 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 SPANXN5Q5MJ07 72 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.09□□□□□ -0.79
VRK3-202ENST00000377011 PRR18Q8N4B5 295 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 LINC00469Q8N7U9 141 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 C22orf15Q8WYQ4 148 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST1H2BHQ93079 126 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 FAM210BQ96KR6 192 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST1H2BNQ99877 126 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 HIST1H2BMQ99879 126 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 SDF2L1Q9HCN8 221 aa10.09□□□□□ -0.79
VRK3-202ENST00000377011 CTXND1A0A1B0GTU2 59 aa10.08□□□□□ -0.8
VRK3-202ENST00000377011 FAM90A9PA6NNJ1 464 aa10.08□□□□□ -0.8
VRK3-202ENST00000377011 CYB5BO43169 146 aa10.08□□□□□ -0.8
VRK3-202ENST00000377011 OR3A1P47881 315 aa10.08□□□□□ -0.8
VRK3-202ENST00000377011 IZUMO4Q1ZYL8 232 aa10.08□□□□□ -0.8
VRK3-202ENST00000377011 OR2B11Q5JQS5 317 aa10.08□□□□□ -0.8
VRK3-202ENST00000377011 KLF17Q5JT82 389 aaPredicted RBP10.08□□□□□ -0.8
VRK3-202ENST00000377011 ACP7Q6ZNF0 438 aa10.08□□□□□ -0.8
VRK3-202ENST00000377011 HSD17B10Q99714 261 aaKnown RBP10.08□□□□□ -0.8
VRK3-202ENST00000377011 OR2D2Q9H210 308 aa10.08□□□□□ -0.8
VRK3-202ENST00000377011 MANBALQ9NQG1 85 aa10.08□□□□□ -0.8
VRK3-202ENST00000377011 IGHV3OR16-10A0A075B7F0 116 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 ZFP92A6NM28 416 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 HBZP02008 142 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 IRF2P14316 349 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 SMIM21Q3B7S5 101 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 AARDQ4LEZ3 155 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 PYY3Q5JQD4 70 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 WDR25Q64LD2 544 aaPredicted RBP10.07□□□□□ -0.8
VRK3-202ENST00000377011 ZNF343Q6P1L6 599 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 LCN15Q6UWW0 184 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 CYP2G1PQ6ZSU1 146 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 HIST3H2BBQ8N257 126 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 FAM216BQ8N7L0 139 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 OR1L1Q8NH94 360 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 PFDN5Q99471 154 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 CCL13Q99616 98 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 SSBP3Q9BWW4 388 aaPredicted RBP10.07□□□□□ -0.8
VRK3-202ENST00000377011 C7orf69Q9H7B7 122 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 SLC39A9Q9NUM3 307 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 NAT8Q9UHE5 227 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 INSIG2Q9Y5U4 225 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 TGIF2-C20orf24A0A0A6YYL0 155 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 TRAV39A0A0B4J263 110 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 UBE2L5PA0A1B0GUS4 154 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 PSPNO60542 156 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 FSHBP01225 129 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 HIST1H1BP16401 226 aaKnown RBP10.07□□□□□ -0.8
VRK3-202ENST00000377011 HTD2P86397 168 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 PRB3Q04118 309 aaPredicted RBP10.07□□□□□ -0.8
VRK3-202ENST00000377011 KRTAP24-1Q3LI83 254 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 TEX36Q5VZQ5 186 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 LHX4Q969G2 390 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 NEIL1Q96FI4 390 aaPredicted RBP10.07□□□□□ -0.8
VRK3-202ENST00000377011 VSIRQ9H7M9 311 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 GFOD1Q9NXC2 390 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 PITPNC1Q9UKF7 332 aa10.07□□□□□ -0.8
VRK3-202ENST00000377011 POLR3KQ9Y2Y1 108 aaPredicted RBP10.07□□□□□ -0.8
VRK3-202ENST00000377011 ODAMA1E959 279 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 PMS2P5A8MQ11 134 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 SRRM5B3KS81 715 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 ZNF737O75373 536 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 FOXH1O75593 365 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 TRGC2P03986 189 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 SRP14P37108 136 aaKnown RBP10.06□□□□□ -0.8
VRK3-202ENST00000377011 DLX1P56177 255 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 GNB2P62879 340 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 MEF2BQ02080 365 aaPredicted RBP10.06□□□□□ -0.8
VRK3-202ENST00000377011 BCL6BQ8N143 479 aaPredicted RBP10.06□□□□□ -0.8
VRK3-202ENST00000377011 OR10P1Q8NGE3 313 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 COQ2Q96H96 371 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 ACTR3CQ9C0K3 210 aaPredicted RBP10.06□□□□□ -0.8
VRK3-202ENST00000377011 URGCP-MRPS24S4R325 110 aa10.06□□□□□ -0.8
VRK3-202ENST00000377011 CEBPZOSA8MTT3 80 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 C17orf112F2Z3M2 114 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 KBTBD11O94819 623 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 FSTL3O95633 263 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 IFNA10P01566 189 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 IGHV4-38-2P0DP08 117 aa10.05□□□□□ -0.8
VRK3-202ENST00000377011 MDKP21741 143 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms