RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 C4orf46Q504U0 113 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 CXorf66Q5JRM2 361 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-202ENST00000374676 Q6ZRM9 215 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 LYZL2Q7Z4W2 148 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 HSD17B13Q7Z5P4 300 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-202ENST00000374676 SLC35G3Q8N808 338 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 C11orf44Q8N8P7 122 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 OR5T1Q8NG75 326 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 RNASE11Q8TAA1 199 aaKnown RBP8.88□□□□□ -0.99
HSPG2-202ENST00000374676 FAM110DQ8TAY7 271 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-202ENST00000374676 MYOZ3Q8TDC0 251 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 CASTOR1Q8WTX7 329 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 FYTTD1Q96QD9 318 aaKnown RBP8.88□□□□□ -0.99
HSPG2-202ENST00000374676 CITED2Q99967 270 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-202ENST00000374676 QTRT1Q9BXR0 403 aaKnown RBP8.88□□□□□ -0.99
HSPG2-202ENST00000374676 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-202ENST00000374676 COA4Q9NYJ1 87 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 PRR13Q9NZ81 148 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 TSSC4Q9Y5U2 329 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-202ENST00000374676 DNHD1Q96M86 4753 aa8.88□□□□□ -0.99
HSPG2-202ENST00000374676 HMX3A6NHT5 357 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 NPIPB5A8MRT5 1133 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 RBMXL2O75526 392 aaKnown RBP8.87□□□□□ -0.99
HSPG2-202ENST00000374676 IL5P05113 134 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 CRYGCP07315 174 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 RAB9AP51151 201 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 KIAA0141Q14154 515 aaPredicted RBP8.87□□□□□ -0.99
HSPG2-202ENST00000374676 IZUMO4Q1ZYL8 232 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 KLK9Q2XQG4 91 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 NMSQ5H8A3 153 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 PLET1Q6UQ28 207 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 NDUFA11Q86Y39 141 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 OR52E5Q8NH55 327 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 COQ8AQ8NI60 647 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 MITD1Q8WV92 249 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 MARVELD1Q9BSK0 173 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 KLK15Q9H2R5 256 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 SLA2Q9H6Q3 261 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 CACFD1Q9UGQ2 172 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 KLK9Q9UKQ9 250 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 TMED3Q9Y3Q3 217 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 MGAM2Q2M2H8 2515 aa8.87□□□□□ -0.99
HSPG2-202ENST00000374676 A0A1B0GU03 582 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 IGLC7A0M8Q6 106 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 ADARB2-AS1A8MUL3 147 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 INMT-MINDY4F8WBC2 141 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 INS-IGF2F8WCM5 200 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 PTTG1O95997 202 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 RPLP1P05386 114 aaKnown RBP8.86□□□□□ -0.99
HSPG2-202ENST00000374676 APELAP0DMC3 54 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 SULT1A3P0DMM9 295 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 SULT1A4P0DMN0 295 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 PF4V1P10720 104 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 SLC25A6P12236 298 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 CTRB1P17538 263 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 PSMB6P28072 239 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 CDX1P47902 265 aaPredicted RBP8.86□□□□□ -0.99
HSPG2-202ENST00000374676 RPL23AP62750 156 aaKnown RBP8.86□□□□□ -0.99
HSPG2-202ENST00000374676 PRCDQ00LT1 54 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 DCTN2Q13561 401 aaKnown RBP8.86□□□□□ -0.99
HSPG2-202ENST00000374676 CTRB2Q6GPI1 263 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 TMEM65Q6PI78 240 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 ZNF431Q8TF32 576 aaPredicted RBP8.86□□□□□ -0.99
HSPG2-202ENST00000374676 CACNG5Q9UF02 275 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 NOTCH3Q9UM47 2321 aa8.86□□□□□ -0.99
HSPG2-202ENST00000374676 TRBV9A0A0B4J1U6 114 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 ST8SIA3O43173 380 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 PRAF2O60831 178 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 DHFRP00374 187 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 AREGP15514 252 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 SPCS3P61009 180 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 WT1-ASQ06250 92 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 SMCO1Q147U7 214 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 PDLIM3Q53GG5 364 aaPredicted RBP8.85□□□□□ -0.99
HSPG2-202ENST00000374676 LCNL1Q6ZST4 164 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 MRPL41Q8IXM3 137 aaKnown RBP8.85□□□□□ -0.99
HSPG2-202ENST00000374676 ZNF491Q8N8L2 437 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 OR10W1Q8NGF6 305 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 OR52B4Q8NGK2 314 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 UBE2E2Q96LR5 201 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 PDCD10Q9BUL8 212 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 HINT2Q9BX68 163 aa8.85□□□□□ -0.99
HSPG2-202ENST00000374676 A0A0G2JLM5 398 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 M0QZ24 198 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 PITX3O75364 302 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 IFNA21P01568 189 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 IFNA17P01571 189 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 TRGV3P03979 118 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 HOXB5P09067 269 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 OR13C7P0DN81 318 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 HIST1H1BP16401 226 aaKnown RBP8.84□□□□□ -0.99
HSPG2-202ENST00000374676 GGNBP1Q5YKI7 109 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 HIST2H2BDQ6DRA6 164 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 C12orf45Q8N5I9 185 aaPredicted RBP8.84□□□□□ -0.99
HSPG2-202ENST00000374676 OR2C3Q8N628 320 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 MS4A10Q96PG2 267 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 SEC22CQ9BRL7 303 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 ZNF355PQ9NSJ1 428 aa8.84□□□□□ -0.99
HSPG2-202ENST00000374676 SNRPGP15A8MWD9 76 aa8.83□□□□□ -1
HSPG2-202ENST00000374676 SPNP16150 400 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms