RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 AKR1E2Q96JD6 320 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 SIRT7Q9NRC8 400 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 MED9Q9NWA0 146 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 KCNS2Q9ULS6 477 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 GAB2Q9UQC2 676 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 INSIG2Q9Y5U4 225 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 MYO9AB2RTY4 2548 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 OTOGQ6ZRI0 2925 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.85□□□□□ -1.95
MCF2-202ENST00000370573 CREBBPQ92793 2442 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 BAHCC1Q9P281 2608 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 A0A087X0K7 114 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 SAA2-SAA4A0A096LPE2 208 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 C3orf85A0A1B0GTC6 90 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 RNASEK-C17orf49H0YIS7 233 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 LY6LH3BQJ8 138 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 SIX6O95475 246 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 DUS4LO95620 317 aaKnown RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 IFNA2P01563 188 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 IFNA4P05014 189 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 SAA2P0DJI9 122 aaPredicted RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 CT45A6P0DMU7 189 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 CT45A5P0DMU8 189 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 CT45A7P0DMV0 189 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 IGHV4-31P0DP07 118 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 F2RP25116 425 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 DUTP33316 252 aaKnown RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 IER3P46695 156 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 RAB7AP51149 207 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 RRAS2P62070 204 aaPredicted RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 MSMO1Q15800 293 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 ZNF585BQ52M93 769 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 PIK3CD-AS1Q5SR53 167 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 SGPP2Q8IWX5 399 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 PDZD9Q8IXQ8 264 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 CIARTQ8N365 385 aaPredicted RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 CCDC71LQ8N9Z2 235 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 NEXN-AS1Q8NBZ9 246 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 OR11H6Q8NGC7 330 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 OR51H1Q8NH63 302 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 OR9G1Q8NH87 305 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 OSR1Q8TAX0 266 aaPredicted RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 MITD1Q8WV92 249 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 SSMEM1Q8WWF3 244 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 GALNT14Q96FL9 552 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 ST6GAL2Q96JF0 529 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 FOXC2Q99958 501 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 TCEAL7Q9BRU2 100 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 MED28Q9H204 178 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 METTL8Q9H825 291 aaKnown RBP2.85□□□□□ -1.95
MCF2-202ENST00000370573 WDR83OSQ9Y284 106 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 TMED3Q9Y3Q3 217 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 KPTNQ9Y664 436 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 CSPG4Q6UVK1 2322 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 ACANP16112 2415 aa2.85□□□□□ -1.95
MCF2-202ENST00000370573 MXRA5Q9NR99 2828 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 SETXQ7Z333 2677 aaKnown RBP2.84□□□□□ -1.95
MCF2-202ENST00000370573 A0A0B4J2A0 478 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 A0A1W2PRD5 423 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 A0A1W2PRF3 423 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 A0A1W2PRM7 423 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 ODF3BA8MYP8 253 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 LEUTXA8MZ59 168 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 KRBOX1C9JBD0 128 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 M0R1X1 148 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 CCSO14618 274 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 RAB29O14966 203 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 SSNA1O43805 119 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 CREBL2O60519 120 aaPredicted RBP2.84□□□□□ -1.95
MCF2-202ENST00000370573 ADAP1O75689 374 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 SLC22A5O76082 557 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 JTBO76095 146 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 IGKV1-39P01597 117 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 IGKV1D-39P04432 117 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 S100A8P05109 93 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 MSMBP08118 114 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 SMIM6P0DI80 62 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 UCP1P25874 307 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 HTR2BP41595 481 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 LPAR6P43657 344 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 REG1BP48304 166 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 ZNF415Q09FC8 603 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 HLA-DRB5Q30154 266 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 ZNF833PQ6ZTB9 187 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 LYZL2Q7Z4W2 148 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 LHFPL4Q7Z7J7 247 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 CMTM1Q8IZ96 169 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 SELENOHQ8IZQ5 122 aaKnown RBP2.84□□□□□ -1.95
MCF2-202ENST00000370573 DYNAPQ8N1N2 210 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 ZNF383Q8NA42 475 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.84□□□□□ -1.95
MCF2-202ENST00000370573 OR4P4Q8NGL7 312 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 OR13D1Q8NGV5 346 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 OR4A16Q8NH70 328 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 DDB2Q92466 427 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 C18orf12Q96KH6 178 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 TMEM56Q96MV1 263 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 CLEC7AQ9BXN2 247 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 TMEM222Q9H0R3 208 aa2.84□□□□□ -1.95
MCF2-202ENST00000370573 PIPOXQ9P0Z9 390 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms