RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 MAP1LC3BQ9GZQ8 125 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 SLC39A9Q9NUM3 307 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 TMEM106BQ9NUM4 274 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 TACC2O95359 2948 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 hADV38S2A0JD32 116 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 CXCL1P09341 107 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 SERF2P84101 59 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 OR4A47Q6IF82 309 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 ZNF429Q86V71 674 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 GATAD1Q8WUU5 269 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 C22orf15Q8WYQ4 148 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 LHX4Q969G2 390 aa10.09□□□□□ -0.79
LMNA-206ENST00000368300 RPUSD1Q9UJJ7 312 aaKnown RBP10.09□□□□□ -0.79
LMNA-206ENST00000368300 RALYQ9UKM9 306 aaKnown RBP10.09□□□□□ -0.79
LMNA-206ENST00000368300 TET2Q6N021 2002 aaPredicted RBP10.09□□□□□ -0.79
LMNA-206ENST00000368300 LOC102723971A0A1B0GUV8 181 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 NKX6-3A6NJ46 265 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 SRRM4A7MD48 611 aaKnown RBP10.08□□□□□ -0.8
LMNA-206ENST00000368300 SCGB1D1O95968 90 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 TRGC1P0CF51 173 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 OR4S2Q8NH73 311 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 TMEM170AQ8WVE7 144 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 PINX1Q96BK5 328 aaKnown RBP10.08□□□□□ -0.8
LMNA-206ENST00000368300 VPS25Q9BRG1 176 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 NPCDR1Q9BY65 106 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 TCF19Q9Y242 345 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 MALRD1Q5VYJ5 2156 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 CCL21O00585 134 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 CT45A6P0DMU7 189 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 CT45A5P0DMU8 189 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 CT45A7P0DMV0 189 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 TAGLN2P37802 199 aaKnown RBP10.08□□□□□ -0.8
LMNA-206ENST00000368300 DIAPH2-AS1Q14236 149 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 DPPA3Q6W0C5 159 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 RAB39BQ96DA2 213 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 CTSZQ9UBR2 303 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 DCHS2Q6V1P9 2916 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 RHEBQ15382 184 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 OR10G4Q8NGN3 311 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 OR10G9Q8NGN4 311 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 OR10G7Q8NGN6 311 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 MBD3L1Q8WWY6 194 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 DNAJC4Q9NNZ3 241 aa10.08□□□□□ -0.8
LMNA-206ENST00000368300 RBFOX2O43251 390 aaKnown RBP eCLIP10.07□□□□□ -0.85e-8■■■□□ 15.8
LMNA-206ENST00000368300 VDAC2P45880 294 aaPredicted RBP10.07□□□□□ -0.8
LMNA-206ENST00000368300 TANC2Q9HCD6 1990 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 MED13LQ71F56 2210 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 TRAV1-1A0A0B4J248 108 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 ZNF705FA8MVS1 300 aaPredicted RBP10.07□□□□□ -0.8
LMNA-206ENST00000368300 DVL1O14640 695 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 HSPB1P04792 205 aaKnown RBP10.07□□□□□ -0.8
LMNA-206ENST00000368300 RPLP1P05386 114 aaKnown RBP10.07□□□□□ -0.8
LMNA-206ENST00000368300 ZNF705DP0CH99 300 aaPredicted RBP10.07□□□□□ -0.8
LMNA-206ENST00000368300 ZNF705BP0CI00 300 aaPredicted RBP10.07□□□□□ -0.8
LMNA-206ENST00000368300 BCL2P10415 239 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 CD1BP29016 333 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 ATP6V1FQ16864 119 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 SLC25A48Q6ZT89 311 aaKnown RBP10.07□□□□□ -0.8
LMNA-206ENST00000368300 ZNF709Q8N972 641 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 FRZBQ92765 325 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 RAB24Q969Q5 203 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 HIST1H2BLQ99880 126 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 HIPK2Q9H2X6 1198 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 NGBQ9NPG2 151 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 LINC00312Q9Y6C7 94 aa10.07□□□□□ -0.8
LMNA-206ENST00000368300 VSTM5A8MXK1 200 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 THBS3P49746 956 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 GNB2P62879 340 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 DLK1P80370 383 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 C11orf42Q8N5U0 333 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 NCOR1P1Q9H4R4 102 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 SLC35D1Q9NTN3 355 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 CISD1Q9NZ45 108 aaKnown RBP10.06□□□□□ -0.8
LMNA-206ENST00000368300 SPTAN1Q13813 2472 aaKnown RBP10.06□□□□□ -0.8
LMNA-206ENST00000368300 AKAP6Q13023 2319 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 MRPL41Q8IXM3 137 aaKnown RBP10.06□□□□□ -0.8
LMNA-206ENST00000368300 C1orf87Q8N0U7 546 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 OR13D1Q8NGV5 346 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 Q8WTZ3 238 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 CORO2AQ92828 525 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 FAM122AQ96E09 287 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 ZNF714Q96N38 554 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 MRPL20Q9BYC9 149 aaKnown RBP10.06□□□□□ -0.8
LMNA-206ENST00000368300 PATZ1Q9HBE1 687 aaKnown RBP10.06□□□□□ -0.8
LMNA-206ENST00000368300 NDUFB3O43676 98 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 CD3EP07766 207 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 GZMBP10144 247 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 MS4A5Q9H3V2 200 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 RAB9BQ9NP90 201 aa10.06□□□□□ -0.8
LMNA-206ENST00000368300 LY6HO94772 140 aa10.05□□□□□ -0.8
LMNA-206ENST00000368300 HEPN1Q6WQI6 88 aa10.05□□□□□ -0.8
LMNA-206ENST00000368300 MALSU1Q96EH3 234 aa10.05□□□□□ -0.8
LMNA-206ENST00000368300 C15orf61A6NNL5 157 aa10.05□□□□□ -0.8
LMNA-206ENST00000368300 PLXNB1O43157 2135 aa10.05□□□□□ -0.8
LMNA-206ENST00000368300 FAM90A2PQ658T7 463 aa10.05□□□□□ -0.8
LMNA-206ENST00000368300 Q8N7P7 452 aa10.05□□□□□ -0.8
LMNA-206ENST00000368300 SSMEM1Q8WWF3 244 aa10.05□□□□□ -0.8
LMNA-206ENST00000368300 SMDT1Q9H4I9 107 aa10.05□□□□□ -0.8
LMNA-206ENST00000368300 ITGB1BP1O14713 200 aa10.04□□□□□ -0.8
LMNA-206ENST00000368300 APOBEC3AP31941 199 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms