RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 SPAARA0A1B0GVQ0 90 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 NKX2-8O15522 239 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 REG1AP05451 166 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 NBEAP1P0C6P0 100 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 ZNF502Q8TBZ5 544 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 IFI27L2Q9H2X8 130 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 ZNF703Q9H7S9 590 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 GP6Q9HCN6 339 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 TBR1Q16650 682 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 TMEM78Q5T7P6 136 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 MRPL14Q6P1L8 145 aaKnown RBP13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 TCF23Q7RTU1 214 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 NRN1Q9NPD7 142 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 ACACAQ13085 2346 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 CREBBPQ92793 2442 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 SPTAN1Q13813 2472 aaKnown RBP13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 EFNA2O43921 213 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 ADCYAP1P18509 176 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 PSG7Q13046 419 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 ECSCRQ19T08 205 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 TCF24Q7RTU0 167 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 FANCMQ8IYD8 2048 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 CASP8AP2Q9UKL3 1982 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 A0A1B0GW64 132 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 NUDT3O95989 172 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 PYY3Q5JQD4 70 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 C1orf185Q5T7R7 199 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 ZNF324BQ6AW86 544 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 OR9G1Q8NH87 305 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 TMEM186Q96B77 213 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 MAP1LC3AQ9H492 121 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 HILPDAQ9Y5L2 63 aa13.15□□□□□ -0.3
TRAPPC11-202ENST00000357207 LINC00271P0C7V0 271 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 LINC00305Q7Z4B0 112 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 DCTN5Q9BTE1 182 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 TRAV1-1A0A0B4J248 108 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 AMBPP02760 352 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 ST6GALNAC3Q8NDV1 305 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 SIGLEC12Q96PQ1 595 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 SNCGO76070 127 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 C2orf83Q53S99 150 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 LAMTOR2Q9Y2Q5 125 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 A0A0G2JMM0 328 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 A0A1W2PPB8 328 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 A0A1W2PRS3 328 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 KIR3DP1A8MWS1 328 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 H3BVH4 76 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 OSR1Q8TAX0 266 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 PMCHL2Q9BQD1 86 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 VSIRQ9H7M9 311 aa13.14□□□□□ -0.31
TRAPPC11-202ENST00000357207 TMEM238LA0A1B0GVL6 79 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 A6NJY4 79 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 MOSP00540 346 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 STPG1Q5TH74 334 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 MIR17HGQ75NE6 70 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 M0R3E3 92 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 NDUFA2O43678 99 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 RPS20P60866 119 aaKnown RBP13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 MESP1Q9BRJ9 268 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 LRRK1Q38SD2 2015 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 TRAV24A0A0B4J272 114 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 PEX7O00628 323 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 CRYGSP22914 178 aa13.13□□□□□ -0.31
TRAPPC11-202ENST00000357207 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 PGPEP1LA6NFU8 196 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 ADMP35318 185 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 ZNF124Q15973 351 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 RSPO3Q9BXY4 272 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 MFAP4P55083 255 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 PEAR1Q5VY43 1037 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 WDR83OSQ9Y284 106 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 QRFPP83859 136 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 RNF144BQ7Z419 303 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 TMEM144Q7Z5S9 345 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 OCC1Q8TAD7 63 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 TMEM208Q9BTX3 173 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 SHANK1Q9Y566 2161 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 GATA2P23769 480 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 GLRXP35754 106 aa13.12□□□□□ -0.31
TRAPPC11-202ENST00000357207 PI4KAP42356 2102 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 DOCK7Q96N67 2140 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 CECR9P0C854 216 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 ARF6P62330 175 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 MBNL2Q5VZF2 373 aaKnown RBP13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 F11RQ9Y624 299 aaKnown RBP13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 PKDREJQ9NTG1 2253 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 RBFOX2O43251 390 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 GDF9O60383 454 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 FHL1Q13642 323 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 TMEM136Q6ZRR5 245 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 OR1N2Q8NGR9 330 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 CACNG8Q8WXS5 425 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 FAM131CQ96AQ9 280 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 A1L4Q6 167 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 CDX4O14627 284 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 ATXN7O15265 892 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 CEACAM1P13688 526 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms