RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ID3Q02535 119 aa14.09□□□□□ -0.15
SDCBP2-201ENST00000339987 CXorf66Q5JRM2 361 aaPredicted RBP14.09□□□□□ -0.15
SDCBP2-201ENST00000339987 HSD17B13Q7Z5P4 300 aaPredicted RBP14.09□□□□□ -0.15
SDCBP2-201ENST00000339987 ABHD5Q8WTS1 349 aa14.09□□□□□ -0.15
SDCBP2-201ENST00000339987 FYTTD1Q96QD9 318 aaKnown RBP14.09□□□□□ -0.15
SDCBP2-201ENST00000339987 GSKIPQ9P0R6 139 aa14.09□□□□□ -0.15
SDCBP2-201ENST00000339987 A0A1W2PN81 502 aa14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 INS-IGF2F8WCM5 200 aa14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 CHRNA7P36544 502 aa14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 NKX2-1P43699 371 aaPredicted RBP14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 VDAC2P45880 294 aaPredicted RBP14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 SRSF2Q01130 221 aaKnown RBP14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 KRTAP21-3Q3LHN1 58 aa14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 OR2T6Q8NHC8 308 aa14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 ASB13Q8WXK3 278 aa14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 TMEM68Q96MH6 324 aa14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 FAM103A1Q9BTL3 118 aaKnown RBP14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 HINT2Q9BX68 163 aa14.08□□□□□ -0.15
SDCBP2-201ENST00000339987 DNHD1Q96M86 4753 aa14.08□□□□□ -0.16
SDCBP2-201ENST00000339987 IGLC7A0M8Q6 106 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 MED6O75586 246 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 TMEM267Q0VDI3 215 aaPredicted RBP14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 AKIRIN2Q53H80 203 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 C19orf54Q5BKX5 351 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 ARSJQ5FYB0 599 aaPredicted RBP14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 PRIMA1Q86XR5 153 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 MRPL41Q8IXM3 137 aaKnown RBP14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 ZNF436Q9C0F3 470 aaPredicted RBP14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 RBKSQ9H477 322 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 PLEKHA3Q9HB20 300 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 TRAV41A0A0B4J266 112 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 NXPH3O95157 252 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 CD83Q01151 205 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 TMEM95Q3KNT9 176 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 ASPHD1Q5U4P2 390 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 STPG2Q8N412 459 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 OR4F5Q8NH21 305 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 ZFP57Q9NU63 452 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 SERTAD4Q9NUC0 356 aa14.07□□□□□ -0.16
SDCBP2-201ENST00000339987 CEBPZOSA8MTT3 80 aa14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 SYNGR2O43760 224 aa14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 MBPP02686 304 aaPredicted RBP14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 GIPP09681 153 aaPredicted RBP14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 HKR1P10072 659 aa14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 HOXA1P49639 335 aaPredicted RBP14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 ECSCRQ19T08 205 aa14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 SPINK9Q5DT21 86 aa14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 UNQ5815/PRO19632Q6UWF5 114 aa14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 LFNGQ8NES3 379 aa14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 OR10W1Q8NGF6 305 aa14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 TAF15Q92804 592 aaKnown RBP eCLIP14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 ENY2Q9NPA8 101 aa14.06□□□□□ -0.16
SDCBP2-201ENST00000339987 WRBO00258 174 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 LY86O95711 162 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 SCGB1D2O95969 90 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 AREGP15514 252 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 EIF2B2P49770 351 aaKnown RBP14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 WT1-ASQ06250 92 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 ZFP69Q49AA0 526 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 TCTE3Q8IZS6 198 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 TTC9CQ8N5M4 171 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 OR2C3Q8N628 320 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 DTD1Q8TEA8 209 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 NOL4LQ96MY1 436 aaPredicted RBP14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 GON7Q9BXV9 100 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 WNT10AQ9GZT5 417 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 MAGT1Q9H0U3 335 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 WSB1Q9Y6I7 421 aa14.05□□□□□ -0.16
SDCBP2-201ENST00000339987 NIPBLQ6KC79 2804 aaeCLIP14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 CUBNO60494 3623 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 NPIPB5A8MRT5 1133 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 G3V318 75 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 BOLA2-SMG1P6H3BVE0 249 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 K7EPK0 472 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 CRYGCP07315 174 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 OR13C7P0DN81 318 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 PSMB6P28072 239 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 RAP2BP61225 183 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 POLR2GP62487 172 aaKnown RBP eCLIP14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 ERHP84090 104 aaKnown RBP14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 CFHR3Q02985 330 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 RAB32Q13637 225 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 LINC01006Q8NI28 216 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 FAM110DQ8TAY7 271 aaPredicted RBP14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 WDR89Q96FK6 387 aaPredicted RBP14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 ST6GAL2Q96JF0 529 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 CIB3Q96Q77 187 aaPredicted RBP14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 LINC00527Q9UJ94 153 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 RCL1Q9Y2P8 373 aaKnown RBP14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 JMJD1CQ15652 2540 aa14.04□□□□□ -0.16
SDCBP2-201ENST00000339987 APELAP0DMC3 54 aa14.03□□□□□ -0.16
SDCBP2-201ENST00000339987 CTRB1P17538 263 aa14.03□□□□□ -0.16
SDCBP2-201ENST00000339987 PPIFP30405 207 aaKnown RBP14.03□□□□□ -0.16
SDCBP2-201ENST00000339987 CTRB2Q6GPI1 263 aa14.03□□□□□ -0.16
SDCBP2-201ENST00000339987 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.03□□□□□ -0.16
SDCBP2-201ENST00000339987 PPP1R1CQ8WVI7 109 aa14.03□□□□□ -0.16
SDCBP2-201ENST00000339987 RAB40CQ96S21 281 aa14.03□□□□□ -0.16
SDCBP2-201ENST00000339987 HIPK2Q9H2X6 1198 aa14.03□□□□□ -0.16
SDCBP2-201ENST00000339987 RANGRFQ9HD47 186 aaPredicted RBP14.03□□□□□ -0.16
SDCBP2-201ENST00000339987 HEYLQ9NQ87 328 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms