RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ZNF525Q8N782 197 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 OR2V2Q96R30 315 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 PMCHL2Q9BQD1 86 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 SPCS1Q9Y6A9 102 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 WIPF3A6NGB9 483 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 FAM216AQ8WUB2 273 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 PKIBQ9C010 78 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 PILRBQ9UKJ0 227 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 TSC2P49815 1807 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 PATJQ8NI35 1801 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 TMEM265A0A087WTH1 108 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 MUC21A0A0G2JKD1 596 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 MUC21A0A140T8X8 626 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 C16orf97H3BN30 126 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 RFPL3SP0C7P2 107 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 MUC21Q5SSG8 566 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 SSBP3Q9BWW4 388 aaPredicted RBP13.59□□□□□ -0.23
NPHP3-201ENST00000337331 AMMECR1Q9Y4X0 333 aaPredicted RBP13.59□□□□□ -0.23
NPHP3-201ENST00000337331 OR51B2Q9Y5P1 312 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 DOCK10Q96BY6 2186 aa13.59□□□□□ -0.23
NPHP3-201ENST00000337331 RBFOX2O43251 390 aaKnown RBP eCLIP13.58□□□□□ -0.232e-10■■■■■ 36.9
NPHP3-201ENST00000337331 TEX43Q6ZNM6 134 aa13.58□□□□□ -0.23
NPHP3-201ENST00000337331 SAXO1Q8IYX7 474 aa13.58□□□□□ -0.23
NPHP3-201ENST00000337331 SMIM17P0DL12 118 aa13.58□□□□□ -0.24
NPHP3-201ENST00000337331 PLAURQ03405 335 aa13.58□□□□□ -0.24
NPHP3-201ENST00000337331 RPP25LQ8N5L8 163 aaKnown RBP13.58□□□□□ -0.24
NPHP3-201ENST00000337331 CHCHD2Q9Y6H1 151 aaPredicted RBP13.58□□□□□ -0.24
NPHP3-201ENST00000337331 ZIC3O60481 467 aa13.58□□□□□ -0.24
NPHP3-201ENST00000337331 FOXA3P55318 350 aaPredicted RBP13.58□□□□□ -0.24
NPHP3-201ENST00000337331 SEPSECSQ9HD40 501 aaKnown RBP13.58□□□□□ -0.24
NPHP3-201ENST00000337331 PLXND1Q9Y4D7 1925 aa13.58□□□□□ -0.24
NPHP3-201ENST00000337331 CORTO00230 105 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 PAX2Q02962 417 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 MIC13Q5XKP0 118 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 LINC01551Q86U37 167 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ITLN1Q8WWA0 313 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 CLEC5AQ9NY25 188 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ELOVL5Q9NYP7 299 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ALPK3Q96L96 1907 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 SCO2A0A1W2PP80 73 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ZG16O60844 167 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ARL14EPLP0DKL9 152 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 NMUP48645 174 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ID3Q02535 119 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 C5orf17Q8NAS9 161 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 OR8A1Q8NGG7 326 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 RASL11BQ9BPW5 248 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 RAB1BQ9H0U4 201 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 MPDU1O75352 247 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 CKS1BP61024 79 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 IBA57Q5T440 356 aaKnown RBP13.57□□□□□ -0.24
NPHP3-201ENST00000337331 ZNF837Q96EG3 531 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-201ENST00000337331 SLC25A10Q9UBX3 287 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-201ENST00000337331 GFRA1P56159 465 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 NFAM1Q8NET5 270 aaPredicted RBP13.57□□□□□ -0.24
NPHP3-201ENST00000337331 STXBP6Q8NFX7 210 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 OR2K2Q8NGT1 345 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 OCC1Q8TAD7 63 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 FAM222BQ8WU58 562 aa13.57□□□□□ -0.24
NPHP3-201ENST00000337331 MYO7BQ6PIF6 2116 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 CSRP1P21291 193 aaKnown RBP13.56□□□□□ -0.24
NPHP3-201ENST00000337331 ZNF645Q8N7E2 425 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 FLVCR1-AS1Q8TAF5 88 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 CRIM1Q9NZV1 1036 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 FBLN5Q9UBX5 448 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 TM4SF20Q53R12 229 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 PERPQ96FX8 193 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 MRPS16Q9Y3D3 137 aaKnown RBP13.56□□□□□ -0.24
NPHP3-201ENST00000337331 ABCA4P78363 2273 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 PPIAL4EA0A075B759 164 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 IGKV1-9A0A0C4DH69 117 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 PPIAL4FP0DN26 164 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 GCSHP23434 173 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 ACP1P24666 158 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 KLF14Q8TD94 323 aaPredicted RBP13.56□□□□□ -0.24
NPHP3-201ENST00000337331 TMUB1Q9BVT8 246 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 ARHGAP21Q5T5U3 1957 aa13.56□□□□□ -0.24
NPHP3-201ENST00000337331 AMY1AP04745 511 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 QRFPP83859 136 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 PPP1R32Q7Z5V6 425 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 JKAMPQ9P055 326 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 IL36RNQ9UBH0 155 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 TRBV9A0A0B4J1U6 114 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 IGHV3-72A0A0B4J1Y9 119 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 IGHV2-70DA0A0C4DH43 119 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 CEACAM18A8MTB9 384 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 FOXL1Q12952 345 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 ZNF658BQ4V348 819 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-201ENST00000337331 DRAM1Q8N682 238 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 TMEM54Q969K7 222 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 CHTOPQ9Y3Y2 248 aaKnown RBP13.55□□□□□ -0.24
NPHP3-201ENST00000337331 FAM90A26D6RGX4 464 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 PLAUP00749 431 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 ESDP10768 282 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 LTBRP36941 435 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 OR10AG1Q8NH19 301 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 PRSS1P07477 247 aa13.55□□□□□ -0.24
NPHP3-201ENST00000337331 GPR6P46095 362 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-201ENST00000337331 F11RQ9Y624 299 aaKnown RBP13.55□□□□□ -0.24
NPHP3-201ENST00000337331 TTC28Q96AY4 2481 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms