RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 NPVFQ9HCQ7 196 aa15.46■□□□□ 0.07
RFTN1-201ENST00000334133 TMEM242Q9NWH2 141 aa15.46■□□□□ 0.07
RFTN1-201ENST00000334133 IGHV3-48P01763 117 aa15.46■□□□□ 0.07
RFTN1-201ENST00000334133 TNFRSF1AP19438 455 aa15.46■□□□□ 0.07
RFTN1-201ENST00000334133 FAM3BP58499 235 aaPredicted RBP15.46■□□□□ 0.07
RFTN1-201ENST00000334133 SLC25A48Q6ZT89 311 aaKnown RBP15.46■□□□□ 0.07
RFTN1-201ENST00000334133 SPACA3Q8IXA5 215 aa15.46■□□□□ 0.07
RFTN1-201ENST00000334133 MIOXQ9UGB7 285 aa15.46■□□□□ 0.07
RFTN1-201ENST00000334133 LINC00587B1AMM8 73 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 SEC14L6B5MCN3 397 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 CDX1P47902 265 aaPredicted RBP15.45■□□□□ 0.06
RFTN1-201ENST00000334133 PMS2P11Q13670 270 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 TMEM200BQ69YZ2 307 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 GSN-AS1Q9NRJ2 163 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 FOXA2Q9Y261 457 aaPredicted RBP15.45■□□□□ 0.06
RFTN1-201ENST00000334133 COL6A6A6NMZ7 2263 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 HRASP01112 189 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 PFN1P07737 140 aaKnown RBP15.45■□□□□ 0.06
RFTN1-201ENST00000334133 C1QTNF9P0C862 333 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 SAA1P0DJI8 122 aaPredicted RBP15.45■□□□□ 0.06
RFTN1-201ENST00000334133 CHRNB4P30926 498 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 OR10D4PQ8NGN7 298 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 DIRC2Q96SL1 478 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 NKX6-3A6NJ46 265 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 FABP1P07148 127 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 PRSS8Q16651 343 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 TEX36Q5VZQ5 186 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 TEPPQ6URK8 271 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 FAM216AQ8WUB2 273 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 GGACTQ9BVM4 153 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 PLEKHA3Q9HB20 300 aa15.45■□□□□ 0.06
RFTN1-201ENST00000334133 SPTBN4Q9H254 2564 aa15.44■□□□□ 0.06
RFTN1-201ENST00000334133 A0A0U1RQK1 487 aa15.44■□□□□ 0.06
RFTN1-201ENST00000334133 SCO2A0A1W2PP80 73 aa15.44■□□□□ 0.06
RFTN1-201ENST00000334133 NBL1P41271 181 aa15.44■□□□□ 0.06
RFTN1-201ENST00000334133 SCNM1Q9BWG6 230 aa15.44■□□□□ 0.06
RFTN1-201ENST00000334133 CTDSP1Q9GZU7 261 aa15.44■□□□□ 0.06
RFTN1-201ENST00000334133 EFNB3Q15768 340 aa15.44■□□□□ 0.06
RFTN1-201ENST00000334133 OR10A7Q8NGE5 316 aa15.44■□□□□ 0.06
RFTN1-201ENST00000334133 OR5B12Q96R08 314 aa15.44■□□□□ 0.06
RFTN1-201ENST00000334133 RAB9BQ9NP90 201 aa15.44■□□□□ 0.06
RFTN1-201ENST00000334133 LSM4Q9Y4Z0 139 aaKnown RBP15.44■□□□□ 0.06
RFTN1-201ENST00000334133 YTHDF2Q9Y5A9 579 aaKnown RBP15.44■□□□□ 0.06
RFTN1-201ENST00000334133 PPIAL4EA0A075B759 164 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 TRGV8A0A0C4DH27 118 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 E7EUB6 86 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 PPIAL4DF5H284 164 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 LYNX1G3V0Z9 82 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 PPP1R2P9O14990 202 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 PPIAL4FP0DN26 164 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 LYNX1P0DP58 116 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 RTL8BQ17RB0 113 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 PYY3Q5JQD4 70 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 C10orf55Q5SWW7 151 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.43■□□□□ 0.06
RFTN1-201ENST00000334133 OR4P4Q8NGL7 312 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 OR4X1Q8NH49 305 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 PPIAL4AQ9Y536 164 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 TRBV20OR9-2A0A075B6H5 130 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 TRBV24-1A0A075B6N3 115 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 TEX50A0A1B0GTY4 177 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 MPDU1O75352 247 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 FABP4P15090 132 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 HARBI1Q96MB7 349 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 ZNF714Q96N38 554 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 DYNLRB1Q9NP97 96 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 ASH1LQ9NR48 2969 aaKnown RBP15.43■□□□□ 0.06
RFTN1-201ENST00000334133 GAR1Q9NY12 217 aaKnown RBP15.43■□□□□ 0.06
RFTN1-201ENST00000334133 LINC00312Q9Y6C7 94 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 MALRD1Q5VYJ5 2156 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 SVEP1Q4LDE5 3571 aa15.43■□□□□ 0.06
RFTN1-201ENST00000334133 UPK2O00526 184 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 ITGB1BP1O14713 200 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 S100A2P29034 98 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 CTSZQ9UBR2 303 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 ANKHD1Q8IWZ3 2542 aaKnown RBP15.42■□□□□ 0.06
RFTN1-201ENST00000334133 IGKV1OR2-108A0A075B7D4 117 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 IGHV3-72A0A0B4J1Y9 119 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 TMEM178BH3BS89 294 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 STAG3L2P0CL84 134 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 STAG3L3P0CL85 134 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 S100PP25815 95 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 TMPRSS3P57727 454 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 TBR1Q16650 682 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 FAM78BQ5VT40 261 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 MIR17HGQ75NE6 70 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 LINC01551Q86U37 167 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 ADTRPQ96IZ2 230 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 TCEAL7Q9BRU2 100 aa15.42■□□□□ 0.06
RFTN1-201ENST00000334133 TRBV23-1A0A0A0MS06 115 aa15.41■□□□□ 0.06
RFTN1-201ENST00000334133 NUBP1P53384 320 aa15.41■□□□□ 0.06
RFTN1-201ENST00000334133 OR10X1Q8NGY0 326 aa15.41■□□□□ 0.06
RFTN1-201ENST00000334133 OR9G1Q8NH87 305 aa15.41■□□□□ 0.06
RFTN1-201ENST00000334133 CORO2AQ92828 525 aa15.41■□□□□ 0.06
RFTN1-201ENST00000334133 NCOR1P1Q9H4R4 102 aa15.41■□□□□ 0.06
RFTN1-201ENST00000334133 TMEM106BQ9NUM4 274 aa15.41■□□□□ 0.06
RFTN1-201ENST00000334133 DVL1O14640 695 aa15.41■□□□□ 0.06
RFTN1-201ENST00000334133 PLAUP00749 431 aa15.41■□□□□ 0.06
RFTN1-201ENST00000334133 HIST3H2BBQ8N257 126 aa15.41■□□□□ 0.06
RFTN1-201ENST00000334133 TMEM37Q8WXS4 190 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms