RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 COTL1Q14019 142 aa13.99□□□□□ -0.17
NSMCE3-201ENST00000332303 CCL19Q99731 98 aa13.99□□□□□ -0.17
NSMCE3-201ENST00000332303 DCTN5Q9BTE1 182 aa13.99□□□□□ -0.17
NSMCE3-201ENST00000332303 ZNF256Q9Y2P7 627 aaPredicted RBP13.99□□□□□ -0.17
NSMCE3-201ENST00000332303 LINC00312Q9Y6C7 94 aa13.99□□□□□ -0.17
NSMCE3-201ENST00000332303 RAXQ9Y2V3 346 aa13.99□□□□□ -0.17
NSMCE3-201ENST00000332303 IGHV3OR16-13A0A075B7E8 117 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 IGLV3-32A0A0A0MS00 114 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 IGHV3-74A0A0B4J1X5 117 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 HAX1O00165 279 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 DLX6P56179 175 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 HIST1H1AQ02539 215 aaPredicted RBP13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 MYO7BQ6PIF6 2116 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 OR10S1Q8NGN2 331 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 RTBDNQ9BSG5 229 aaPredicted RBP13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 MPTX1A8MV57 137 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 ADIPOQQ15848 244 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 CRIPAKQ8N1N5 446 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 PQLC2LA1A4F0 135 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 FOXI3A8MTJ6 420 aaPredicted RBP13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 RBFOX2O43251 390 aaKnown RBP eCLIP13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 C9orf106Q8NAJ2 232 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 C21orf62Q9NYP8 219 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 IGHV3OR16-10A0A075B7F0 116 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 A0A0G2JLM5 398 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 LHX2P50458 406 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 HBBP68871 147 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 RTN4RL2Q86UN3 420 aa13.98□□□□□ -0.17
NSMCE3-201ENST00000332303 LOC107984156A0A0G2JMH3 177 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 LCN2P80188 198 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 ARL17AQ8IVW1 177 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 TUBGCP6Q96RT7 1819 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 A0A0B4J293 547 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 DUX5Q96PT3 197 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 GAGE10A6NGK3 116 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 FABP2P12104 132 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 HINT1P49773 126 aaPredicted RBP13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 FAM181BA6NEQ2 426 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 FAM74A4Q5TZK3 123 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 FLVCR1-AS1Q8TAF5 88 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 FBXL7Q9UJT9 491 aa13.97□□□□□ -0.17
NSMCE3-201ENST00000332303 CSRP1P21291 193 aaKnown RBP13.96□□□□□ -0.17
NSMCE3-201ENST00000332303 GTF3AQ92664 365 aaKnown RBP13.96□□□□□ -0.17
NSMCE3-201ENST00000332303 TRBV20OR9-2A0A075B6H5 130 aa13.96□□□□□ -0.17
NSMCE3-201ENST00000332303 TRBV6-7A0A0A0MS04 114 aa13.96□□□□□ -0.17
NSMCE3-201ENST00000332303 IGFBP2P18065 325 aa13.96□□□□□ -0.17
NSMCE3-201ENST00000332303 FREM3P0C091 2139 aa13.96□□□□□ -0.17
NSMCE3-201ENST00000332303 MOB4Q9Y3A3 225 aa13.96□□□□□ -0.18
NSMCE3-201ENST00000332303 CIRBPQ14011 172 aaKnown RBP13.96□□□□□ -0.18
NSMCE3-201ENST00000332303 PRSS8Q16651 343 aa13.96□□□□□ -0.18
NSMCE3-201ENST00000332303 RNASEH2CQ8TDP1 164 aaKnown RBP13.96□□□□□ -0.18
NSMCE3-201ENST00000332303 KLK15Q9H2R5 256 aa13.96□□□□□ -0.18
NSMCE3-201ENST00000332303 GRIFINA4D1Z8 144 aa13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 CGAP01215 116 aa13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 IGKV1D-33P01593 117 aa13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 IGKV1-33P01594 117 aa13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 ZFP36L1Q07352 338 aaKnown RBP13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 ZNF56Q15929 161 aa13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 HIST1H4GQ99525 98 aa13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 TAF1LQ8IZX4 1826 aa13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 CBLN1P23435 193 aa13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 UQCRFS1P47985 274 aa13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 OR4D5Q8NGN0 318 aa13.95□□□□□ -0.18
NSMCE3-201ENST00000332303 RNF222A6NCQ9 220 aa13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 CELA3BP08861 270 aa13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 LGALS3P17931 250 aaKnown RBP13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 MRPL20Q9BYC9 149 aaKnown RBP13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 CARHSP1Q9Y2V2 147 aaKnown RBP13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 DDTP30046 118 aa13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 OR52E5Q8NH55 327 aa13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 H7C2G1 150 aa13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 TCF21O43680 179 aa13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 CCL1P22362 96 aa13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 NUTF2P61970 127 aaKnown RBP13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 EFNB1P98172 346 aa13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 NR2C2APQ86WQ0 139 aa13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 GEMIN7Q9H840 131 aaKnown RBP13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 FOXA2Q9Y261 457 aaPredicted RBP13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 TMEM105Q8N8V8 129 aa13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 MTCL1Q9Y4B5 1905 aaKnown RBP13.94□□□□□ -0.18
NSMCE3-201ENST00000332303 IGKV1-9A0A0C4DH69 117 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 CEACAM4O75871 244 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 OTX1P32242 354 aaPredicted RBP13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 TMEM144Q7Z5S9 345 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 PLPPR1Q8TBJ4 325 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 YPEL1O60688 119 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 SRP19P09132 144 aaKnown RBP13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 LINC00271P0C7V0 271 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 FOXA3P55318 350 aaPredicted RBP13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 PPP1R27Q86WC6 154 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 TEX45Q8NA69 505 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 YPEL2Q96QA6 119 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 LOC102724200A0A096LPH7 203 aaPredicted RBP13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 TRAV24A0A0B4J272 114 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 PEX7O00628 323 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 LYPD3O95274 346 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 TFF3Q07654 80 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 ZNF525Q8N782 197 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 ARPC1AQ92747 370 aa13.93□□□□□ -0.18
NSMCE3-201ENST00000332303 RNASE6Q93091 150 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms