RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ZNF343Q6P1L6 599 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 PUSL1Q8N0Z8 303 aaKnown RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 LFNGQ8NES3 379 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 OR5AP2Q8NGF4 316 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 OR5H6Q8NGV6 325 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 TMEM167AQ8TBQ9 72 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 ABHD5Q8WTS1 349 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 ACOT12Q8WYK0 555 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 MAFIPQ8WZ33 124 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 ST8SIA2Q92186 375 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 SLC25A46Q96AG3 418 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 S100A16Q96FQ6 103 aaKnown RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 SPIN2AQ99865 258 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 SPIN2BQ9BPZ2 258 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 NEURL2Q9BR09 285 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 SRSF8Q9BRL6 282 aaKnown RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 SEC22CQ9BRL7 303 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 RANGRFQ9HD47 186 aaPredicted RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 ZNF256Q9Y2P7 627 aaPredicted RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 LSM4Q9Y4Z0 139 aaKnown RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 TRAV18A0A075B6X5 111 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 TRBV9A0A0B4J1U6 114 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 IGKV1D-13A0A0B4J2D9 117 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 C13orf42A0A1B0GVH6 325 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 SMIM31A0A1B0GVY4 71 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 WI2-2373I1.2A0A1W2PRP0 233 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 PRSS29PA6NIE9 313 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 NPIPB5A8MRT5 1133 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 SULT1C2O00338 296 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 KBTBD11O94819 623 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 CNIH1O95406 144 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 PRB2P02812 416 aaPredicted RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 TRGV3P03979 118 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 SAA1P0DJI8 122 aaPredicted RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 IGKV1-13P0DP09 117 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 HOXD3P31249 432 aaPredicted RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 EIF2B2P49770 351 aaKnown RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 TPPP2P59282 170 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 TAS2R46P59540 309 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 MXD1Q05195 221 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 CATR1Q13166 79 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 DHRS11Q6UWP2 260 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 TTC9CQ8N5M4 171 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 ADAD2Q8NCV1 583 aaKnown RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 GRPEL2Q8TAA5 225 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 MITD1Q8WV92 249 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 SRSF12Q8WXF0 261 aaKnown RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 DCUN1D4Q92564 292 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 ZNF479Q96JC4 524 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 DUX3Q96PT4 197 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 ELOVL1Q9BW60 279 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 BET1LQ9NYM9 111 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 COMMD9Q9P000 198 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 ELF5Q9UKW6 265 aaPredicted RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 ZNF257Q9Y2Q1 563 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 TRRAPQ9Y4A5 3859 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 IGHV4OR15-8A0A075B7B6 117 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 A0A087WW49 117 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 SMIM30A4D0T7 59 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 A8MZ25 164 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 LINC00587B1AMM8 73 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 FCGR3BO75015 233 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 CCNKO75909 580 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 ACTL6BO94805 426 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 OR2A4O95047 310 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 PPYP01298 95 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 NFYAP23511 347 aaPredicted RBP4.86□□□□□ -1.63
SMG1-201ENST00000330588 PTTG1IPP53801 180 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 RAB25P57735 213 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 LINC00205P59089 165 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 TAS2R31P59538 309 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 PJVKQ0ZLH3 352 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 KLF5Q13887 457 aaPredicted RBP4.86□□□□□ -1.63
SMG1-201ENST00000330588 TNXAQ16473 311 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 ETFRF1Q6IPR1 90 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 Q6ZRM9 215 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 OR13F1Q8NGS4 319 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 OR2K2Q8NGT1 345 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 C15orf40Q8WUR7 153 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 SNAPC3Q92966 411 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 DLX4Q92988 240 aaPredicted RBP4.86□□□□□ -1.63
SMG1-201ENST00000330588 OR2A7Q96R45 310 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 CLCC1Q96S66 551 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 ALX4Q9H161 411 aaPredicted RBP4.86□□□□□ -1.63
SMG1-201ENST00000330588 RNF167Q9H6Y7 350 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 ZNF430Q9H8G1 570 aaPredicted RBP4.86□□□□□ -1.63
SMG1-201ENST00000330588 PLEKHA2Q9HB19 425 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 IFT46Q9NQC8 304 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 PEF1Q9UBV8 284 aaKnown RBP4.86□□□□□ -1.63
SMG1-201ENST00000330588 SLC45A2Q9UMX9 530 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 PKD1L1Q8TDX9 2849 aa4.86□□□□□ -1.63
SMG1-201ENST00000330588 MSGN1A6NI15 193 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 GABARAPO95166 117 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 HPRT1P00492 218 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 IGLV1-51P01701 117 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 MBP02144 154 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 IL6RP08887 468 aaPredicted RBP4.85□□□□□ -1.63
SMG1-201ENST00000330588 HIST1H1BP16401 226 aaKnown RBP4.85□□□□□ -1.63
SMG1-201ENST00000330588 FCGR2CP31995 323 aa4.85□□□□□ -1.63
SMG1-201ENST00000330588 PRSS3P35030 304 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms