RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 OR10J4P0C629 311 aa7.14□□□□□ -1.27
CLK1-201ENST00000321356 GATA4P43694 442 aa7.14□□□□□ -1.27
CLK1-201ENST00000321356 LGALS4P56470 323 aa7.14□□□□□ -1.27
CLK1-201ENST00000321356 SRSF6Q13247 344 aaKnown RBP7.14□□□□□ -1.27
CLK1-201ENST00000321356 CORO2AQ92828 525 aa7.14□□□□□ -1.27
CLK1-201ENST00000321356 LEAP2Q969E1 77 aa7.14□□□□□ -1.27
CLK1-201ENST00000321356 EAF1Q96JC9 268 aaPredicted RBP7.14□□□□□ -1.27
CLK1-201ENST00000321356 UHRF2Q96PU4 802 aa7.14□□□□□ -1.27
CLK1-201ENST00000321356 NAGKQ9UJ70 344 aa7.14□□□□□ -1.27
CLK1-201ENST00000321356 SLC45A2Q9UMX9 530 aa7.14□□□□□ -1.27
CLK1-201ENST00000321356 POLR3KQ9Y2Y1 108 aaPredicted RBP7.14□□□□□ -1.27
CLK1-201ENST00000321356 CADP27708 2225 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 IGLV3-9A0A075B6K5 115 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 MBD3L4A6NDZ8 208 aaPredicted RBP7.13□□□□□ -1.27
CLK1-201ENST00000321356 MBD3L3A6NE82 208 aaPredicted RBP7.13□□□□□ -1.27
CLK1-201ENST00000321356 MBD3L5A6NJ08 208 aaPredicted RBP7.13□□□□□ -1.27
CLK1-201ENST00000321356 M0R296 226 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 SELLP14151 372 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 IGFBP2P18065 325 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 CBLN1P23435 193 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 COL8A2P25067 703 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 KLF3P57682 345 aaPredicted RBP7.13□□□□□ -1.27
CLK1-201ENST00000321356 MRPS11P82912 194 aaKnown RBP7.13□□□□□ -1.27
CLK1-201ENST00000321356 ZNF90Q03938 601 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 C3orf36Q3SXR2 165 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 SEM1Q6ZVN7 128 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 DEFB123Q8N688 67 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 MBD3L2Q8NHZ7 208 aaPredicted RBP7.13□□□□□ -1.27
CLK1-201ENST00000321356 ZCCHC14Q8WYQ9 949 aaKnown RBP7.13□□□□□ -1.27
CLK1-201ENST00000321356 MS4A10Q96PG2 267 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 ZNF257Q9Y2Q1 563 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 SPENQ96T58 3664 aaKnown RBP7.13□□□□□ -1.27
CLK1-201ENST00000321356 GRIFINA4D1Z8 144 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 SLC17A3O00476 420 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 EREGO14944 169 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 SCGB1D1O95968 90 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 WT1P19544 449 aaPredicted RBP7.13□□□□□ -1.27
CLK1-201ENST00000321356 HNF1AP20823 631 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 OR10J1P30954 320 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 GLRXP35754 106 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 ATP5IP56385 69 aaPredicted RBP7.13□□□□□ -1.27
CLK1-201ENST00000321356 ERVFC1-1P60608 527 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 PAFAH1B2P68402 229 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 PRCDQ00LT1 54 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 STUMQ69YW2 141 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 MIR17HGQ75NE6 70 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 PNKDQ8N490 385 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 OR4P4Q8NGL7 312 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 CMTM2Q8TAZ6 248 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 ITLN1Q8WWA0 313 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 ENY2Q9NPA8 101 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 TMEM167BQ9NRX6 74 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 TMEM106BQ9NUM4 274 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 PRNDQ9UKY0 176 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 OR51B2Q9Y5P1 312 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 V9GYV3 84 aa7.13□□□□□ -1.27
CLK1-201ENST00000321356 TNCP24821 2201 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 RAI1Q7Z5J4 1906 aaPredicted RBP7.12□□□□□ -1.27
CLK1-201ENST00000321356 IGKV1OR2-108A0A075B7D4 117 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 TRBV9A0A0B4J1U6 114 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 A8MXE2 369 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 UPK2O00526 184 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 MYOD1P15172 320 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 ZNF83P51522 516 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 Q0VG73 95 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 TMEM30BQ3MIR4 351 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 TIMM23BQ5SRD1 257 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 FAM201AQ5SY85 155 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 Q6ZWC4 215 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 MMD2Q8IY49 270 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 ZNF503Q96F45 646 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 SLC35E1Q96K37 410 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 MRPL18Q9H0U6 180 aaKnown RBP7.12□□□□□ -1.27
CLK1-201ENST00000321356 ASCL3Q9NQ33 180 aa7.12□□□□□ -1.27
CLK1-201ENST00000321356 SPRY3O43610 288 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 CRISP2P16562 243 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 TPPP2P59282 170 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 NUTF2P61970 127 aaKnown RBP7.11□□□□□ -1.27
CLK1-201ENST00000321356 USF2Q15853 346 aaPredicted RBP7.11□□□□□ -1.27
CLK1-201ENST00000321356 RPEL1Q2QD12 228 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 KRTCAP3Q53RY4 240 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 C2orf83Q53S99 150 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 CENPWQ5EE01 88 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 DUX4L9Q6RFH8 374 aaPredicted RBP7.11□□□□□ -1.27
CLK1-201ENST00000321356 TEX43Q6ZNM6 134 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 SLC25A48Q6ZT89 311 aaKnown RBP7.11□□□□□ -1.27
CLK1-201ENST00000321356 TGIF2LXQ8IUE1 241 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 LYG1Q8N1E2 194 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 OR1L6Q8NGR2 347 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 GAFA1Q96PS6 74 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 NEU1Q99519 415 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 NABP2Q9BQ15 211 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 C19orf24Q9BVV8 132 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 SNHG12Q9BXW3 62 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 RNF7Q9UBF6 113 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 IL19Q9UHD0 177 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 PLCE1Q9P212 2302 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 J3QR06 171 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 M0R1B8 84 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 TM4SF5O14894 197 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms