RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 FOXE3Q13461 319 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 VWC2Q2TAL6 325 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 TIMM23BQ5SRD1 257 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 C1orf210Q8IVY1 113 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 MMD2Q8IY49 270 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 ZNF525Q8N782 197 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 SPACA5Q96QH8 159 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 TXNDC17Q9BRA2 123 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 CDIP1Q9H305 208 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 C19orf25Q9UFG5 118 aaPredicted RBP5.54□□□□□ -1.52
ZNF540-201ENST00000316433 MCTS1Q9ULC4 181 aaKnown RBP5.54□□□□□ -1.52
ZNF540-201ENST00000316433 IGHV1OR15-9A0A0B4J2B8 117 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 GAGE12JA6NER3 117 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 FABP5P3A8MUU1 101 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 DUX1O43812 170 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 EFNA2O43921 213 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 SCGB2A1O75556 95 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 GAGE7O76087 117 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 HLA-DQA1P01909 254 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 CRYAAP02489 173 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 CA3P07451 260 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 GAGE12FP0CL80 117 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 GAGE12GP0CL81 117 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 GAGE12IP0CL82 117 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 PRTN3P24158 256 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 VDAC2P45880 294 aaPredicted RBP5.53□□□□□ -1.52
ZNF540-201ENST00000316433 OR3A4PP47883 348 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 ATP5IP56385 69 aaPredicted RBP5.53□□□□□ -1.52
ZNF540-201ENST00000316433 PPP1CAP62136 330 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 PLP2Q04941 152 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 GAGE4Q13068 117 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 KLRD1Q13241 179 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 DAZAP2Q15038 168 aaPredicted RBP5.53□□□□□ -1.52
ZNF540-201ENST00000316433 ETDBQ3ZM63 59 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 PEAR1Q5VY43 1037 aaPredicted RBP5.53□□□□□ -1.52
ZNF540-201ENST00000316433 SLC35E4Q6ICL7 350 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 Q6ZUT4 128 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 RNF144BQ7Z419 303 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 SH2D6Q7Z4S9 175 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 TMEFF1Q8IYR6 380 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 PRR22Q8IZ63 422 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 OR1L3Q8NH93 324 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 OR2T6Q8NHC8 308 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 BADQ92934 168 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 SPTSSAQ969W0 71 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 C20orf78Q9BR46 151 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 C1QTNF5Q9BXJ0 243 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 CEP350Q5VT06 3117 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 TRBV20OR9-2A0A075B6H5 130 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 SYS1-DBNDD2H3BUS1 97 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 ANGPTL7O43827 346 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 PDCD6O75340 191 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 BLVRBP30043 206 aaPredicted RBP5.53□□□□□ -1.52
ZNF540-201ENST00000316433 KIR2DL2P43627 348 aaPredicted RBP5.53□□□□□ -1.52
ZNF540-201ENST00000316433 TIGITQ495A1 244 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 MRPL14Q6P1L8 145 aaKnown RBP5.53□□□□□ -1.52
ZNF540-201ENST00000316433 ZNF695Q8IW36 515 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 WDR31Q8NA23 367 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 MED29Q9NX70 200 aa5.53□□□□□ -1.52
ZNF540-201ENST00000316433 FER1L5A0AVI2 2057 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 C3orf85A0A1B0GTC6 90 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 LOC101059948A0A1B0GTJ6 334 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 H0Y8X5 98 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.52□□□□□ -1.53
ZNF540-201ENST00000316433 KLF7O75840 302 aaPredicted RBP5.52□□□□□ -1.53
ZNF540-201ENST00000316433 NHLRC4P0CG21 123 aaPredicted RBP5.52□□□□□ -1.53
ZNF540-201ENST00000316433 FCGR2BP31994 310 aaPredicted RBP5.52□□□□□ -1.53
ZNF540-201ENST00000316433 CLRN1P58418 232 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 PCBD1P61457 104 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 PSG7Q13046 419 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 ACP7Q6ZNF0 438 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 ARPC1AQ92747 370 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 RAB40CQ96S21 281 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 SIGLEC8Q9NYZ4 499 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 A0A0C4DFX4 3053 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 F5H5K5 113 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 ZFAND5O76080 213 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 OR9G9P0C7N8 305 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 P0C879 139 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 HLA-DOBP13765 273 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 INSL3P51460 131 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 XGP55808 180 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 DSCR4P56555 118 aaPredicted RBP5.52□□□□□ -1.53
ZNF540-201ENST00000316433 CX3CL1P78423 397 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 CEACAM16Q2WEN9 425 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 RNASEKQ6P5S7 137 aaKnown RBP5.52□□□□□ -1.53
ZNF540-201ENST00000316433 LCNL1Q6ZST4 164 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 WDR5BQ86VZ2 330 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 SYT8Q8NBV8 401 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 OCC1Q8TAD7 63 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 OSR1Q8TAX0 266 aaPredicted RBP5.52□□□□□ -1.53
ZNF540-201ENST00000316433 NRGNQ92686 78 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 KCNIP2Q9NS61 270 aa5.52□□□□□ -1.53
ZNF540-201ENST00000316433 TRGV10A0A0A0MS01 117 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 A0A1W2PQM1 296 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 LRRC30A6NM36 301 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 SPINK4O60575 86 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 APCSP02743 223 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 AMY1AP04745 511 aa5.51□□□□□ -1.53
ZNF540-201ENST00000316433 SP9P0CG40 484 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms