RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 NKX6-3A6NJ46 265 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 APCSP02743 223 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 MYOD1P15172 320 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 USF1P22415 310 aaPredicted RBP12.14□□□□□ -0.47
COL6A2-202ENST00000310645 LYG1Q8N1E2 194 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 OR4C5Q8NGB2 326 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 Q8TCH9 128 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 CLCF1Q9UBD9 225 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 TRBV9A0A0B4J1U6 114 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 PROP1O75360 226 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 HSBP1O75506 76 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 COTL1Q14019 142 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 ORAOV1Q8WV07 137 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 C1orf159Q96HA4 380 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 ALKBH7Q9BT30 221 aaPredicted RBP12.14□□□□□ -0.47
COL6A2-202ENST00000310645 TCF19Q9Y242 345 aa12.14□□□□□ -0.47
COL6A2-202ENST00000310645 TNRC6BQ9UPQ9 1833 aaKnown RBP12.13□□□□□ -0.47
COL6A2-202ENST00000310645 C9JCJ5 164 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 MT-ND6P03923 174 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 DUTP33316 252 aaKnown RBP12.13□□□□□ -0.47
COL6A2-202ENST00000310645 KLF3P57682 345 aaPredicted RBP12.13□□□□□ -0.47
COL6A2-202ENST00000310645 RAB31Q13636 194 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 VAMP3Q15836 100 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 OR10J3Q5JRS4 329 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 IBA57Q5T440 356 aaKnown RBP12.13□□□□□ -0.47
COL6A2-202ENST00000310645 MOB3BQ86TA1 216 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 ZNF439Q8NDP4 499 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 ZNF331Q9NQX6 463 aaPredicted RBP12.13□□□□□ -0.47
COL6A2-202ENST00000310645 SPINT2O43291 252 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 GPR6P46095 362 aaPredicted RBP12.13□□□□□ -0.47
COL6A2-202ENST00000310645 CXCL12P48061 93 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 UBE2V1Q13404 147 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 SLC35E4Q6ICL7 350 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 LEAP2Q969E1 77 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 TMEM140Q9NV12 185 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 B4GALT7Q9UBV7 327 aa12.13□□□□□ -0.47
COL6A2-202ENST00000310645 VDAC2P45880 294 aaPredicted RBP12.12□□□□□ -0.47
COL6A2-202ENST00000310645 SLAQ13239 276 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 CDX2Q99626 313 aaPredicted RBP12.12□□□□□ -0.47
COL6A2-202ENST00000310645 COX11Q9Y6N1 276 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 AMY1AP04745 511 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 MPV17P39210 176 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 TNXAQ16473 311 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 ANKRD39Q53RE8 183 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 RNASEKQ6P5S7 137 aaKnown RBP12.12□□□□□ -0.47
COL6A2-202ENST00000310645 SPEM1Q8N4L4 309 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 FAM168AQ92567 244 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 LINC00479Q96M42 142 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 CHODLQ9H9P2 273 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 IL19Q9UHD0 177 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 MED13Q9UHV7 2174 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 SMPD2O60906 423 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 NANOS1Q8WY41 292 aaKnown RBP12.12□□□□□ -0.47
COL6A2-202ENST00000310645 ARFGEF3Q5TH69 2177 aa12.12□□□□□ -0.47
COL6A2-202ENST00000310645 M0R2Z0 102 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 NPY1RP25929 384 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 S1PR3Q99500 378 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 FAM173AQ9BQD7 235 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 ENY2Q9NPA8 101 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 YLPM1P49750 1951 aaKnown RBP12.11□□□□□ -0.47
COL6A2-202ENST00000310645 CAMPP49913 170 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 PRR27Q6MZM9 219 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 SSBP4Q9BWG4 385 aaPredicted RBP12.11□□□□□ -0.47
COL6A2-202ENST00000310645 GP6Q9HCN6 339 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 LYZL6O75951 148 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 HLA-DQA1P01909 254 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 MFAP2P55001 183 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
COL6A2-202ENST00000310645 ABHD17BQ5VST6 288 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 ARL6IP6Q8N6S5 226 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 SLC24A4Q8NFF2 622 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 BCL2L2Q92843 193 aaPredicted RBP12.11□□□□□ -0.47
COL6A2-202ENST00000310645 TTTY12Q9BZ98 90 aa12.11□□□□□ -0.47
COL6A2-202ENST00000310645 CADP27708 2225 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 PATE3B3GLJ2 98 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 PRSS46E5RG02 174 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 CER1O95813 267 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 FABP6P51161 128 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 FBLN7Q53RD9 439 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 ZNF766Q5HY98 468 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 TMEM251Q8N6I4 163 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 ZNF576Q9H609 170 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 LSM4Q9Y4Z0 139 aaKnown RBP12.1□□□□□ -0.47
COL6A2-202ENST00000310645 HEATR1Q9H583 2144 aaKnown RBP12.1□□□□□ -0.47
COL6A2-202ENST00000310645 CBY3A6NI87 242 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 M0QZ24 198 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 RPL8P62917 257 aaKnown RBP12.1□□□□□ -0.47
COL6A2-202ENST00000310645 C18orf32Q8TCD1 76 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 NABP2Q9BQ15 211 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 DEFB127Q9H1M4 99 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 GAL3ST2Q9H3Q3 398 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 ZNF355PQ9NSJ1 428 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 DSPP15924 2871 aaKnown RBP12.1□□□□□ -0.47
COL6A2-202ENST00000310645 ZDBF2Q9HCK1 2354 aa12.1□□□□□ -0.47
COL6A2-202ENST00000310645 LOC105371242A0A075B767 164 aa12.09□□□□□ -0.47
COL6A2-202ENST00000310645 IGLL1P15814 213 aa12.09□□□□□ -0.47
COL6A2-202ENST00000310645 SAPCD1Q5SSQ6 148 aa12.09□□□□□ -0.47
COL6A2-202ENST00000310645 ALKBH2Q6NS38 261 aa12.09□□□□□ -0.47
COL6A2-202ENST00000310645 ACP7Q6ZNF0 438 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms