RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 OR4S2Q8NH73 311 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 SFRP2Q96HF1 295 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 CCL13Q99616 98 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 LSM4Q9Y4Z0 139 aaKnown RBP17.11■□□□□ 0.33
RELA-201ENST00000308639 TANC2Q9HCD6 1990 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 TMPRSS2O15393 492 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 GATA2P23769 480 aaPredicted RBP17.11■□□□□ 0.33
RELA-201ENST00000308639 NPY1RP25929 384 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 RPL15P61313 204 aaKnown RBP17.11■□□□□ 0.33
RELA-201ENST00000308639 CR1LQ2VPA4 569 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 HLA-DRB5Q30154 266 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 COA6Q5JTJ3 125 aaKnown RBP17.11■□□□□ 0.33
RELA-201ENST00000308639 SLC24A4Q8NFF2 622 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 OR52E5Q8NH55 327 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 CBLN4Q9NTU7 201 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 TRAPPC1Q9Y5R8 145 aa17.11■□□□□ 0.33
RELA-201ENST00000308639 PCNX1Q96RV3 2341 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 SLC17A3O00476 420 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 LHBP01229 141 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 LINC00614P0C842 121 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 CISD2Q8N5K1 135 aaKnown RBP17.1■□□□□ 0.33
RELA-201ENST00000308639 TUBG2Q9NRH3 451 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 IDI2-AS1Q9NZ38 188 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 FAM215AQ9Y5M1 114 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 MPDU1O75352 247 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 IGKV1-16P04430 117 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 TYMSP04818 313 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 FRMD6-AS1P0C7T7 363 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 MZT1Q08AG7 82 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 MLANAQ16655 118 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 TMEM144Q7Z5S9 345 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 NPVFQ9HCQ7 196 aa17.1■□□□□ 0.33
RELA-201ENST00000308639 CXorf1O96002 111 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 GCHFRP30047 84 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 MRPS11P82912 194 aaKnown RBP17.09■□□□□ 0.33
RELA-201ENST00000308639 PIP4P1Q86T03 277 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 OR4P4Q8NGL7 312 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 IMMP2LQ96T52 175 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 FAM90A9PA6NNJ1 464 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 K7EN84 100 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 CNN1P51911 297 aaKnown RBP17.09■□□□□ 0.33
RELA-201ENST00000308639 TMPRSS3P57727 454 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 ERVFC1-1P60608 527 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 RPL31P62899 125 aaKnown RBP17.09■□□□□ 0.33
RELA-201ENST00000308639 MIR17HGQ75NE6 70 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 ZCCHC14Q8WYQ9 949 aaKnown RBP17.09■□□□□ 0.33
RELA-201ENST00000308639 RND1Q92730 232 aa17.09■□□□□ 0.33
RELA-201ENST00000308639 KBTBD11-OT1A0A1B0GTJ5 212 aa17.08■□□□□ 0.33
RELA-201ENST00000308639 MDFIC2A0A1B0GVS7 189 aa17.08■□□□□ 0.33
RELA-201ENST00000308639 GRIFINA4D1Z8 144 aa17.08■□□□□ 0.33
RELA-201ENST00000308639 PDLIM4P50479 330 aa17.08■□□□□ 0.33
RELA-201ENST00000308639 ZCCHC24Q8N2G6 241 aaKnown RBP17.08■□□□□ 0.33
RELA-201ENST00000308639 FAM216AQ8WUB2 273 aa17.08■□□□□ 0.33
RELA-201ENST00000308639 ACY3Q96HD9 319 aa17.08■□□□□ 0.33
RELA-201ENST00000308639 GCM1Q9NP62 436 aa17.08■□□□□ 0.33
RELA-201ENST00000308639 PKDREJQ9NTG1 2253 aa17.08■□□□□ 0.32
RELA-201ENST00000308639 MBD3L4A6NDZ8 208 aaPredicted RBP17.08■□□□□ 0.32
RELA-201ENST00000308639 MBD3L3A6NE82 208 aaPredicted RBP17.08■□□□□ 0.32
RELA-201ENST00000308639 MBD3L5A6NJ08 208 aaPredicted RBP17.08■□□□□ 0.32
RELA-201ENST00000308639 K7EM74 188 aa17.08■□□□□ 0.32
RELA-201ENST00000308639 TIMP3P35625 211 aa17.08■□□□□ 0.32
RELA-201ENST00000308639 FAM27E3Q08E93 113 aa17.08■□□□□ 0.32
RELA-201ENST00000308639 TEPPQ6URK8 271 aa17.08■□□□□ 0.32
RELA-201ENST00000308639 MRPL41Q8IXM3 137 aaKnown RBP17.08■□□□□ 0.32
RELA-201ENST00000308639 MBD3L2Q8NHZ7 208 aaPredicted RBP17.08■□□□□ 0.32
RELA-201ENST00000308639 ELOVL5Q9NYP7 299 aa17.08■□□□□ 0.32
RELA-201ENST00000308639 SRRM4A7MD48 611 aaKnown RBP17.07■□□□□ 0.32
RELA-201ENST00000308639 OR4A8P0C604 315 aa17.07■□□□□ 0.32
RELA-201ENST00000308639 CFHR2P36980 270 aa17.07■□□□□ 0.32
RELA-201ENST00000308639 HSPE1P61604 102 aaKnown RBP17.07■□□□□ 0.32
RELA-201ENST00000308639 TMEM14BQ9NUH8 114 aa17.07■□□□□ 0.32
RELA-201ENST00000308639 BSNQ9UPA5 3926 aa17.07■□□□□ 0.32
RELA-201ENST00000308639 CD33P20138 364 aa17.07■□□□□ 0.32
RELA-201ENST00000308639 LRFN3Q9BTN0 628 aa17.07■□□□□ 0.32
RELA-201ENST00000308639 OR51B2Q9Y5P1 312 aa17.07■□□□□ 0.32
RELA-201ENST00000308639 GLRXP35754 106 aa17.06■□□□□ 0.32
RELA-201ENST00000308639 OR5I1Q13606 314 aa17.06■□□□□ 0.32
RELA-201ENST00000308639 TEX38Q6PEX7 206 aa17.06■□□□□ 0.32
RELA-201ENST00000308639 DYSFO75923 2080 aa17.06■□□□□ 0.32
RELA-201ENST00000308639 RPLP1P05386 114 aaKnown RBP17.06■□□□□ 0.32
RELA-201ENST00000308639 ADMP35318 185 aa17.06■□□□□ 0.32
RELA-201ENST00000308639 TMEM249Q2WGJ8 235 aa17.06■□□□□ 0.32
RELA-201ENST00000308639 GAFA1Q96PS6 74 aa17.06■□□□□ 0.32
RELA-201ENST00000308639 SPTBN2O15020 2390 aa17.06■□□□□ 0.32
RELA-201ENST00000308639 IGKV1OR2-108A0A075B7D4 117 aa17.05■□□□□ 0.32
RELA-201ENST00000308639 TRGV8A0A0C4DH27 118 aa17.05■□□□□ 0.32
RELA-201ENST00000308639 IGHV1-46P01743 117 aa17.05■□□□□ 0.32
RELA-201ENST00000308639 CBLN1P23435 193 aa17.05■□□□□ 0.32
RELA-201ENST00000308639 TIMM23BQ5SRD1 257 aa17.05■□□□□ 0.32
RELA-201ENST00000308639 ENY2Q9NPA8 101 aa17.05■□□□□ 0.32
RELA-201ENST00000308639 RIF1Q5UIP0 2472 aaKnown RBP17.05■□□□□ 0.32
RELA-201ENST00000308639 TRGV10A0A0A0MS01 117 aa17.05■□□□□ 0.32
RELA-201ENST00000308639 LCN2P80188 198 aa17.05■□□□□ 0.32
RELA-201ENST00000308639 TNFAIP6P98066 277 aaPredicted RBP17.05■□□□□ 0.32
RELA-201ENST00000308639 FOXA2Q9Y261 457 aaPredicted RBP17.05■□□□□ 0.32
RELA-201ENST00000308639 PIEZO2Q9H5I5 2752 aa17.05■□□□□ 0.32
RELA-201ENST00000308639 A6NNC1 897 aa17.04■□□□□ 0.32
RELA-201ENST00000308639 M0QZK8 103 aa17.04■□□□□ 0.32
RELA-201ENST00000308639 RAB7AP51149 207 aa17.04■□□□□ 0.32
RELA-201ENST00000308639 ASPHD1Q5U4P2 390 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms