RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 MRPL54Q6P161 138 aaKnown RBP13.65□□□□□ -0.22
SSH3-201ENST00000308127 PQLC2Q6ZP29 291 aa13.65□□□□□ -0.22
SSH3-201ENST00000308127 LHFPL4Q7Z7J7 247 aa13.65□□□□□ -0.22
SSH3-201ENST00000308127 LYG1Q8N1E2 194 aa13.65□□□□□ -0.22
SSH3-201ENST00000308127 TMEM106BQ9NUM4 274 aa13.65□□□□□ -0.22
SSH3-201ENST00000308127 C21orf140B9A014 251 aa13.65□□□□□ -0.22
SSH3-201ENST00000308127 OR10J1P30954 320 aa13.65□□□□□ -0.22
SSH3-201ENST00000308127 TFPI2P48307 235 aa13.65□□□□□ -0.22
SSH3-201ENST00000308127 NPY1RP25929 384 aa13.65□□□□□ -0.22
SSH3-201ENST00000308127 CENPWQ5EE01 88 aa13.65□□□□□ -0.22
SSH3-201ENST00000308127 INO80CQ6PI98 192 aaPredicted RBP13.65□□□□□ -0.22
SSH3-201ENST00000308127 MMD2Q8IY49 270 aa13.65□□□□□ -0.22
SSH3-201ENST00000308127 OR7C2O60412 319 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 MGST1P10620 155 aaKnown RBP13.64□□□□□ -0.23
SSH3-201ENST00000308127 PMCHP20382 165 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 TDGF1P3P51864 188 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 OR4A47Q6IF82 309 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 GCSAMQ8N6F7 178 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 RND1Q92730 232 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 SERTAD4Q9NUC0 356 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 SAA2-SAA4A0A096LPE2 208 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 IGHV2OR16-5A0A0B4J2B6 119 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 IGHV1-18A0A0C4DH31 117 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 IGKV3-15P01624 115 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 SAA2P0DJI9 122 aaPredicted RBP13.64□□□□□ -0.23
SSH3-201ENST00000308127 LOXL3P58215 753 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 TEPPQ6URK8 271 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 SLC24A4Q8NFF2 622 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 RAB1CQ92928 201 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 LINC00479Q96M42 142 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 FER1L6-AS2Q96M78 137 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 RCHY1Q96PM5 261 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 OR2V2Q96R30 315 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 NPVFQ9HCQ7 196 aa13.64□□□□□ -0.23
SSH3-201ENST00000308127 RIF1Q5UIP0 2472 aaKnown RBP13.63□□□□□ -0.23
SSH3-201ENST00000308127 ADH4P08319 380 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 CT45A1Q5HYN5 189 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 CT45A3Q8NHU0 189 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 EAF1Q96JC9 268 aaPredicted RBP13.63□□□□□ -0.23
SSH3-201ENST00000308127 UHRF2Q96PU4 802 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 DCAF16Q9NXF7 216 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 IL36BQ9NZH7 164 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 CLCF1Q9UBD9 225 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 NAT8BQ9UHF3 227 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 TANC2Q9HCD6 1990 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 MMP23AO75900 390 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 CD99P14209 185 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 HTD2P86397 168 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 TPTE2P1Q5T6R2 138 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 SSBP3Q9BWW4 388 aaPredicted RBP13.63□□□□□ -0.23
SSH3-201ENST00000308127 GNB4Q9HAV0 340 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 FBXL7Q9UJT9 491 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 SVEP1Q4LDE5 3571 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 ZNF318Q5VUA4 2279 aa13.63□□□□□ -0.23
SSH3-201ENST00000308127 IGKV1OR2-108A0A075B7D4 117 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 KIR2DL5BA0A0G2JN68 375 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 KIR2DL5BA0A0G2JPC4 375 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 IGKV1-16P04430 117 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 CD59P13987 128 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 FAM90A1Q86YD7 464 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 ATOH7Q8N100 152 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 KIR2DL5AQ8N109 375 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 FAM19A2Q8N3H0 131 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 FDCSPQ8NFU4 85 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 CALYQ9NYX4 217 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 LSM4Q9Y4Z0 139 aaKnown RBP13.62□□□□□ -0.23
SSH3-201ENST00000308127 TRAV5A0A0B4J249 113 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 WT1P19544 449 aaPredicted RBP13.62□□□□□ -0.23
SSH3-201ENST00000308127 TNFSF10P50591 281 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 TPPP2P59282 170 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 OR10W1Q8NGF6 305 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 PRR7Q8TB68 274 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 SGK494Q96LW2 274 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 RELNP78509 3460 aa13.62□□□□□ -0.23
SSH3-201ENST00000308127 PRB4P10163 310 aaPredicted RBP13.61□□□□□ -0.23
SSH3-201ENST00000308127 FOSL1P15407 271 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 YPEL3P61236 119 aaPredicted RBP13.61□□□□□ -0.23
SSH3-201ENST00000308127 RHOBP62745 196 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 LBHQ53QV2 105 aaPredicted RBP13.61□□□□□ -0.23
SSH3-201ENST00000308127 ENY2Q9NPA8 101 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
SSH3-201ENST00000308127 NPSP0C0P6 89 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 GNG4P50150 75 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 SUMO1P63165 101 aaKnown RBP13.61□□□□□ -0.23
SSH3-201ENST00000308127 RPP30P78346 268 aaKnown RBP13.61□□□□□ -0.23
SSH3-201ENST00000308127 MORN5Q5VZ52 161 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 TMEM178AQ8NBL3 297 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 OR5AU1Q8NGC0 362 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 OR9G1Q8NH87 305 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 TRAV34A0A0B4J273 112 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 M0R1B8 84 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 RAB4AP20338 218 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 LGALS4P56470 323 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 RPEL1Q2QD12 228 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 ITLN1Q8WWA0 313 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 BTF3L4Q96K17 158 aa13.61□□□□□ -0.23
SSH3-201ENST00000308127 ZZEF1O43149 2961 aa13.6□□□□□ -0.23
SSH3-201ENST00000308127 AKAP13Q12802 2813 aa13.6□□□□□ -0.23
SSH3-201ENST00000308127 HELTA6NFD8 242 aa13.6□□□□□ -0.23
SSH3-201ENST00000308127 C15orf61A6NNL5 157 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms