RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TMEM136Q6ZRR5 245 aa12.15□□□□□ -0.46
COL6A2-201ENST00000300527 PPP1R32Q7Z5V6 425 aa12.15□□□□□ -0.46
COL6A2-201ENST00000300527 MCRIP2Q9BUT9 160 aaKnown RBP12.15□□□□□ -0.46
COL6A2-201ENST00000300527 MRPS17Q9Y2R5 130 aaKnown RBP12.15□□□□□ -0.46
COL6A2-201ENST00000300527 TNCP24821 2201 aa12.15□□□□□ -0.47
COL6A2-201ENST00000300527 SH2D7A6NKC9 451 aaPredicted RBP12.14□□□□□ -0.47
COL6A2-201ENST00000300527 SPINT2O43291 252 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 CLDN18P56856 261 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 IL11RAQ14626 422 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 VWC2Q2TAL6 325 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 TEPPQ6URK8 271 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 Q8IYB0 196 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 ZBTB34Q8NCN2 500 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 NPVFQ9HCQ7 196 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 TCF19Q9Y242 345 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 PRRX1P54821 245 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 RBX1P62877 108 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 RPL8P62917 257 aaKnown RBP12.14□□□□□ -0.47
COL6A2-201ENST00000300527 TNXAQ16473 311 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 WDR73Q6P4I2 378 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 NIT1Q86X76 327 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 FAM168AQ92567 244 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 GNB1LQ9BYB4 327 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 ZNF355PQ9NSJ1 428 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 A0A1W2PN81 502 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 CD24P25063 80 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 MPV17P39210 176 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 SLAQ13239 276 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 TRAT1Q6PIZ9 186 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 RAB1CQ92928 201 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 TMEM140Q9NV12 185 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 B4GALT7Q9UBV7 327 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 ARFGEF3Q5TH69 2177 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 ABCA1O95477 2261 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 CADP27708 2225 aa12.14□□□□□ -0.47
COL6A2-201ENST00000300527 NKX6-3A6NJ46 265 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 AGFG2O95081 481 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 IGHV3-48P01763 117 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 CTRLP40313 264 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 FBLN7Q53RD9 439 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 ABHD17BQ5VST6 288 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 MRPL52Q86TS9 123 aaKnown RBP12.13□□□□□ -0.47
COL6A2-201ENST00000300527 TMEM45BQ96B21 275 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 LOXL4Q96JB6 756 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 S1PR3Q99500 378 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 SFXN3Q9BWM7 321 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 WASHC3Q9Y3C0 194 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 NPY1RP25929 384 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 CXCL12P48061 93 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 KLF3P57682 345 aaPredicted RBP12.13□□□□□ -0.47
COL6A2-201ENST00000300527 UBE2V1Q13404 147 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 MLANAQ16655 118 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 SAP25Q8TEE9 199 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 GFRA3O60609 400 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 FOXA3P55318 350 aaPredicted RBP12.13□□□□□ -0.47
COL6A2-201ENST00000300527 ZNF596Q8TC21 504 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 COX11Q9Y6N1 276 aa12.13□□□□□ -0.47
COL6A2-201ENST00000300527 IGHV3OR15-7A0A075B7D8 119 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 AMY1AP04745 511 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 CX3CL1P78423 397 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 DCAF12Q5T6F0 453 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 DSPP15924 2871 aaKnown RBP12.12□□□□□ -0.47
COL6A2-201ENST00000300527 WDFY4Q6ZS81 3184 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 TIMM8AO60220 97 aaPredicted RBP12.12□□□□□ -0.47
COL6A2-201ENST00000300527 MPDU1O75352 247 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 ESDP10768 282 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 ZNF146Q15072 292 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 Q8TCH9 128 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 ZC2HC1AQ96GY0 325 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 OR8B2Q96RD0 313 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 LINC00470Q9BZP3 86 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 IL19Q9UHD0 177 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 ZDBF2Q9HCK1 2354 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 MRPL49Q13405 166 aaKnown RBP12.12□□□□□ -0.47
COL6A2-201ENST00000300527 LHFPL4Q7Z7J7 247 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 ORAOV1Q8WV07 137 aa12.12□□□□□ -0.47
COL6A2-201ENST00000300527 NANOS1Q8WY41 292 aaKnown RBP12.12□□□□□ -0.47
COL6A2-201ENST00000300527 TECRQ9NZ01 308 aaKnown RBP12.12□□□□□ -0.47
COL6A2-201ENST00000300527 HEATR1Q9H583 2144 aaKnown RBP12.11□□□□□ -0.47
COL6A2-201ENST00000300527 ROS1P08922 2347 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 PRB4P10163 310 aaPredicted RBP12.11□□□□□ -0.47
COL6A2-201ENST00000300527 ERVK11-1P61568 191 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 TRIP6Q15654 476 aaKnown RBP12.11□□□□□ -0.47
COL6A2-201ENST00000300527 LPAL2Q16609 132 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 KIR3DL3Q8N743 410 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 OR2D3Q8NGH3 330 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 NABP2Q9BQ15 211 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 GP6Q9HCN6 339 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 TRGV10A0A0A0MS01 117 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 TRAV5A0A0B4J249 113 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 IGLL1P15814 213 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 DUTP33316 252 aaKnown RBP12.11□□□□□ -0.47
COL6A2-201ENST00000300527 TCTAP57738 103 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 LDLRAD2Q5SZI1 272 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 TXNDC17Q9BRA2 123 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 ZNF318Q5VUA4 2279 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 NCOR1O75376 2440 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 KIAA1549Q9HCM3 1950 aa12.11□□□□□ -0.47
COL6A2-201ENST00000300527 PLAUP00749 431 aa12.1□□□□□ -0.47
COL6A2-201ENST00000300527 MT-ND6P03923 174 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms