RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 MRPL20Q9BYC9 149 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 IGFBP2P18065 325 aa14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 RTL8BQ17RB0 113 aa14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 PPIAL4EA0A075B759 164 aa14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 PPIAL4DF5H284 164 aa14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 UPK2O00526 184 aa14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 SOD3P08294 240 aa14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 PPIAL4FP0DN26 164 aa14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 CHRNA7P36544 502 aa14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 PLEKHA3Q9HB20 300 aa14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 PPIAL4AQ9Y536 164 aa14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 TLN1Q9Y490 2541 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-201ENST00000291842 TMEM178BH3BS89 294 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 FOXH1O75593 365 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 SAA1P0DJI8 122 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 DIAPH2-AS1Q14236 149 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 TBR1Q16650 682 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 MLANAQ16655 118 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 OR10W1Q8NGF6 305 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 ZNF714Q96N38 554 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 LRFN3Q9BTN0 628 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 GPR61Q9BZJ8 451 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 GAL3ST2Q9H3Q3 398 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 PRNDQ9UKY0 176 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 POLEQ07864 2286 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 TEX50A0A1B0GTY4 177 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 A0A1W2PPQ1 181 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 STAG3L2P0CL84 134 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 STAG3L3P0CL85 134 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 EFNB3Q15768 340 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 OR10A7Q8NGE5 316 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 OR5B12Q96R08 314 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 PCGF1Q9BSM1 259 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 JKAMPQ9P055 326 aa14.97□□□□□ -0.01
SHKBP1-201ENST00000291842 ACTL6BO94805 426 aa14.96□□□□□ -0.01
SHKBP1-201ENST00000291842 POU2AF1Q16633 256 aa14.96□□□□□ -0.01
SHKBP1-201ENST00000291842 ZNF114Q8NC26 417 aa14.96□□□□□ -0.01
SHKBP1-201ENST00000291842 PHOX2AO14813 284 aa14.96□□□□□ -0.02
SHKBP1-201ENST00000291842 PDE6DO43924 150 aa14.96□□□□□ -0.02
SHKBP1-201ENST00000291842 PRCDQ00LT1 54 aa14.96□□□□□ -0.02
SHKBP1-201ENST00000291842 SCNM1Q9BWG6 230 aa14.96□□□□□ -0.02
SHKBP1-201ENST00000291842 GSN-AS1Q9NRJ2 163 aa14.96□□□□□ -0.02
SHKBP1-201ENST00000291842 TMEM106BQ9NUM4 274 aa14.96□□□□□ -0.02
SHKBP1-201ENST00000291842 CXorf1O96002 111 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 FAM87AP0C7U9 286 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 HNF1AP20823 631 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 GATA2P23769 480 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 S100PP25815 95 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 CHRNB4P30926 498 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 LINC01551Q86U37 167 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 OR4X1Q8NH49 305 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 HARBI1Q96MB7 349 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 KCNIP2Q9NS61 270 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 YTHDF2Q9Y5A9 579 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 SCO2A0A1W2PP80 73 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 PPP1R2P9O14990 202 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 FABP1P07148 127 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 ZNF833PQ6ZTB9 187 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 GAR1Q9NY12 217 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 MIOXQ9UGB7 285 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 ZNF835Q9Y2P0 537 aa14.95□□□□□ -0.02
SHKBP1-201ENST00000291842 C1QTNF9P0C862 333 aa14.94□□□□□ -0.02
SHKBP1-201ENST00000291842 S100A2P29034 98 aa14.94□□□□□ -0.02
SHKBP1-201ENST00000291842 RNASE6Q93091 150 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-201ENST00000291842 DYNLRB1Q9NP97 96 aa14.94□□□□□ -0.02
SHKBP1-201ENST00000291842 CTSZQ9UBR2 303 aa14.94□□□□□ -0.02
SHKBP1-201ENST00000291842 TRBV20OR9-2A0A075B6H5 130 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 E7EQL1 145 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 DVL1O14640 695 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 FAM3BP58499 235 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 MEF2CQ06413 473 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 TMEM249Q2WGJ8 235 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 HIST3H2BBQ8N257 126 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 OR4P4Q8NGL7 312 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 OR10D4PQ8NGN7 298 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 IGKV1OR2-108A0A075B7D4 117 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 SHISA9B4DS77 424 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 E7EUB6 86 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 H0YJW9 148 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 NDUFB3O43676 98 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 VENTXO95231 258 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 GCHFRP30047 84 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 RAB31Q13636 194 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 PYY3Q5JQD4 70 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 CDPF1Q6NVV7 123 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 OR10X1Q8NGY0 326 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 SRD5A3Q9H8P0 318 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 ZNF257Q9Y2Q1 563 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 LRBAP50851 2863 aa14.93□□□□□ -0.02
SHKBP1-201ENST00000291842 LINC00587B1AMM8 73 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 PPP5D1E7EU14 171 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 RPL29P47914 159 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 RHOBP62745 196 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 S100A12P80511 92 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 FAM78BQ5VT40 261 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 MIR17HGQ75NE6 70 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 ANAPC16Q96DE5 110 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 PTPRQQ9UMZ3 2332 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 APOA2P02652 100 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 LINC00869P0C866 280 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms