RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PGPEP1LA6NFU8 196 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 TYMSP04818 313 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 ADMP35318 185 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 ZFP36L2P47974 494 aaKnown RBP4.9□□□□□ -1.63
VCAN-201ENST00000265077 TMEM30BQ3MIR4 351 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 SLC23A3Q6PIS1 610 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 OR9G4Q8NGQ1 327 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 SFXN3Q9BWM7 321 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 CCL28Q9NRJ3 127 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 PILRBQ9UKJ0 227 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.9□□□□□ -1.63
VCAN-201ENST00000265077 KLF4O43474 513 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 LGALS7P47929 136 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 MGAT2Q10469 447 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 PIGYQ3MUY2 71 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 GCSAMLQ5JQS6 135 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 TEPPQ6URK8 271 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 SH2D7A6NKC9 451 aaPredicted RBP4.9□□□□□ -1.63
VCAN-201ENST00000265077 F5H697 171 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 ORM2P19652 201 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 FAM27BQ5VT28 67 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 TEX43Q6ZNM6 134 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 PQLC2Q6ZP29 291 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 MYOZ3Q8TDC0 251 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 NKX2-8O15522 239 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 HERV-K104P63124 156 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 BHLHA15Q7RTS1 189 aaPredicted RBP4.9□□□□□ -1.63
VCAN-201ENST00000265077 RPS4XP62701 263 aaKnown RBP4.9□□□□□ -1.63
VCAN-201ENST00000265077 KCNMB1Q16558 191 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 SLC25A33Q9BSK2 321 aa4.9□□□□□ -1.63
VCAN-201ENST00000265077 DLL1O00548 723 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 C10orf113Q5VZT2 155 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 SAXO1Q8IYX7 474 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 TMEM252Q8N6L7 170 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 OR52M1Q8NGK5 317 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 SLC25A40Q8TBP6 338 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 SPANXCQ9NY87 97 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 C1QCP02747 245 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 FGF12P61328 243 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 LHX8Q68G74 356 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 RBPMS2Q6ZRY4 209 aaKnown RBP4.89□□□□□ -1.63
VCAN-201ENST00000265077 ZNF703Q9H7S9 590 aaPredicted RBP4.89□□□□□ -1.63
VCAN-201ENST00000265077 FZR1Q9UM11 496 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 SNAI2O43623 268 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 FAM19A2Q8N3H0 131 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 A0A1W2PPV9 198 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 FAM231BA6NCW3 169 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 OR10J3Q5JRS4 329 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 ONECUT1Q9UBC0 465 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 KHDC1LQ5JSQ8 128 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 OR4C13Q8NGP0 309 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 ABHD14AQ9BUJ0 271 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 RAB1BQ9H0U4 201 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 FAM181BA6NEQ2 426 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 IGHMP01871 453 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 THY1P04216 161 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 APOBEC3AP31941 199 aaPredicted RBP4.89□□□□□ -1.63
VCAN-201ENST00000265077 KIR3DS1Q14943 382 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 TMEM256Q8N2U0 113 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 MBNL3Q9NUK0 354 aaKnown RBP4.89□□□□□ -1.63
VCAN-201ENST00000265077 GPR132Q9UNW8 380 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 DXOO77932 396 aaKnown RBP4.89□□□□□ -1.63
VCAN-201ENST00000265077 SSTR5P35346 364 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 RND2P52198 227 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 COPS9Q8WXC6 57 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 RTN4RQ9BZR6 473 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 FAM60AQ9NP50 221 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 GAS1P54826 345 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 NXPH1P58417 271 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 IBA57Q5T440 356 aaKnown RBP4.89□□□□□ -1.63
VCAN-201ENST00000265077 LSM10Q969L4 123 aaKnown RBP4.89□□□□□ -1.63
VCAN-201ENST00000265077 ZNF479Q96JC4 524 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 PAXXQ9BUH6 204 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 C19orf24Q9BVV8 132 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 CLEC1BQ9P126 229 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 TM4SF20Q53R12 229 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 C1orf53Q5VUE5 145 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 AP5S1Q9NUS5 200 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 IL36BQ9NZH7 164 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 MTORP42345 2549 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 C9orf118A6NHY6 69 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 K7N7A8 449 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 ZNF735P0CB33 412 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 PSG2P11465 335 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 CSRP3P50461 194 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 CEACAM21Q3KPI0 293 aa4.89□□□□□ -1.63
VCAN-201ENST00000265077 TRBV6-7A0A0A0MS04 114 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 C9orf172C9J069 976 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 PSG3Q16557 428 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 FOXQ1Q9C009 403 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 F8P00451 2351 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 SPINK9Q5DT21 86 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 TCTEX1D4Q5JR98 221 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.88□□□□□ -1.63
VCAN-201ENST00000265077 TAF15Q92804 592 aaKnown RBP eCLIP4.88□□□□□ -1.63
VCAN-201ENST00000265077 LRRC75BQ2VPJ9 315 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 SLC35E4Q6ICL7 350 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 TCF23Q7RTU1 214 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 OR1K1Q8NGR3 316 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 COX6CP09669 75 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms