RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 ZP3P21754 424 aa11.04□□□□□ -0.64
SDHD-209ENST00000640554 LPAR6P43657 344 aa11.04□□□□□ -0.64
SDHD-209ENST00000640554 EGFEM1PQ0D2K5 195 aa11.04□□□□□ -0.64
SDHD-209ENST00000640554 RNASE12Q5GAN4 147 aaKnown RBP11.04□□□□□ -0.64
SDHD-209ENST00000640554 HSD17B13Q7Z5P4 300 aaPredicted RBP11.04□□□□□ -0.64
SDHD-209ENST00000640554 FAM223AQ8IWN6 122 aa11.04□□□□□ -0.64
SDHD-209ENST00000640554 DUX3Q96PT4 197 aa11.04□□□□□ -0.64
SDHD-209ENST00000640554 OR5B12Q96R08 314 aa11.04□□□□□ -0.64
SDHD-209ENST00000640554 TSC22D3Q99576 134 aa11.04□□□□□ -0.64
SDHD-209ENST00000640554 RBM38Q9H0Z9 239 aaKnown RBP11.04□□□□□ -0.64
SDHD-209ENST00000640554 FKBP11Q9NYL4 201 aa11.04□□□□□ -0.64
SDHD-209ENST00000640554 PLXNB1O43157 2135 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 TRBV9A0A0B4J1U6 114 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 MARCH11A6NNE9 402 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 SNAPC5O75971 98 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 ATG12O94817 140 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 S1PR2O95136 353 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 AKAIN1P0CW23 69 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 PGAM2P15259 253 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 HIST1H1BP16401 226 aaKnown RBP11.03□□□□□ -0.64
SDHD-209ENST00000640554 SURF2Q15527 256 aaPredicted RBP11.03□□□□□ -0.64
SDHD-209ENST00000640554 ZNF585BQ52M93 769 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 PHLDA2Q53GA4 152 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 TBC1D26Q86UD7 250 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 CCDC71LQ8N9Z2 235 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 NECAP1Q8NC96 275 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 CASTOR1Q8WTX7 329 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 TMEM140Q9NV12 185 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 CMYA5Q8N3K9 4069 aa11.03□□□□□ -0.64
SDHD-209ENST00000640554 TEX22C9J3V5 150 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 CYB5BO43169 146 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 KRASP01116 189 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 SERPINE2P07093 398 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 CRYGCP07315 174 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 KLK9Q2XQG4 91 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 ZNF343Q6P1L6 599 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 OR1L8Q8NGR8 309 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 DEDD2Q8WXF8 326 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 SCGB3A2Q96PL1 93 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 FYTTD1Q96QD9 318 aaKnown RBP11.02□□□□□ -0.65
SDHD-209ENST00000640554 PRRT1Q99946 306 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 KLK9Q9UKQ9 250 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 PRNDQ9UKY0 176 aa11.02□□□□□ -0.65
SDHD-209ENST00000640554 ANKRD20A5PA0PJZ0 165 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 SEC14L6B5MCN3 397 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 OVOL1O14753 267 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 IGHV3-11P01762 117 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 PSMB6P28072 239 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 PIGPP57054 158 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 OR2B8PP59922 312 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 RHOGP84095 191 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 ATP5G2Q06055 141 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 DCTN2Q13561 401 aaKnown RBP11.01□□□□□ -0.65
SDHD-209ENST00000640554 TATDN3Q17R31 274 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 SCGB2B2Q4G0G5 96 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 C10orf55Q5SWW7 151 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 ZNF429Q86V71 674 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 QTRT1Q9BXR0 403 aaKnown RBP11.01□□□□□ -0.65
SDHD-209ENST00000640554 COPZ2Q9P299 210 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 PEF1Q9UBV8 284 aaKnown RBP11.01□□□□□ -0.65
SDHD-209ENST00000640554 SCP2D1Q9UJQ7 156 aa11.01□□□□□ -0.65
SDHD-209ENST00000640554 IGHV4OR15-8A0A075B7B6 117 aa11□□□□□ -0.65
SDHD-209ENST00000640554 A0A087WW49 117 aa11□□□□□ -0.65
SDHD-209ENST00000640554 HMX3A6NHT5 357 aa11□□□□□ -0.65
SDHD-209ENST00000640554 H0Y980 276 aa11□□□□□ -0.65
SDHD-209ENST00000640554 CTSDP07339 412 aaPredicted RBP11□□□□□ -0.65
SDHD-209ENST00000640554 TRAPPC2P0DI81 140 aa11□□□□□ -0.65
SDHD-209ENST00000640554 TRAPPC2BP0DI82 140 aa11□□□□□ -0.65
SDHD-209ENST00000640554 APELAP0DMC3 54 aa11□□□□□ -0.65
SDHD-209ENST00000640554 CTRB1P17538 263 aa11□□□□□ -0.65
SDHD-209ENST00000640554 AP3S2P59780 193 aa11□□□□□ -0.65
SDHD-209ENST00000640554 CTRB2Q6GPI1 263 aa11□□□□□ -0.65
SDHD-209ENST00000640554 OR4D10Q8NGI6 311 aa11□□□□□ -0.65
SDHD-209ENST00000640554 OR5B3Q8NH48 314 aa11□□□□□ -0.65
SDHD-209ENST00000640554 DCUN1D4Q92564 292 aa11□□□□□ -0.65
SDHD-209ENST00000640554 THAP7Q9BT49 309 aaPredicted RBP11□□□□□ -0.65
SDHD-209ENST00000640554 ELOVL1Q9BW60 279 aa11□□□□□ -0.65
SDHD-209ENST00000640554 ALX4Q9H161 411 aaPredicted RBP11□□□□□ -0.65
SDHD-209ENST00000640554 AKIP1Q9NQ31 210 aa11□□□□□ -0.65
SDHD-209ENST00000640554 SLC2A8Q9NY64 477 aa11□□□□□ -0.65
SDHD-209ENST00000640554 THYN1Q9P016 225 aa11□□□□□ -0.65
SDHD-209ENST00000640554 E7EUB6 86 aa10.99□□□□□ -0.65
SDHD-209ENST00000640554 DEFA4P12838 97 aa10.99□□□□□ -0.65
SDHD-209ENST00000640554 FAUP35544 74 aaKnown RBP10.99□□□□□ -0.65
SDHD-209ENST00000640554 G6PCP35575 357 aa10.99□□□□□ -0.65
SDHD-209ENST00000640554 SPANXN2Q5MJ10 180 aa10.99□□□□□ -0.65
SDHD-209ENST00000640554 H2BFWTQ7Z2G1 175 aa10.99□□□□□ -0.65
SDHD-209ENST00000640554 DLX4Q92988 240 aaPredicted RBP10.99□□□□□ -0.65
SDHD-209ENST00000640554 SEC22AQ96IW7 307 aa10.99□□□□□ -0.65
SDHD-209ENST00000640554 TMEM56Q96MV1 263 aa10.99□□□□□ -0.65
SDHD-209ENST00000640554 AURKAIP1Q9NWT8 199 aaPredicted RBP10.99□□□□□ -0.65
SDHD-209ENST00000640554 C14orf166Q9Y224 244 aaKnown RBP10.99□□□□□ -0.65
SDHD-209ENST00000640554 TRAV3A0A0B4J244 114 aa10.98□□□□□ -0.65
SDHD-209ENST00000640554 C3orf85A0A1B0GTC6 90 aa10.98□□□□□ -0.65
SDHD-209ENST00000640554 TEX50A0A1B0GTY4 177 aa10.98□□□□□ -0.65
SDHD-209ENST00000640554 HOXD3P31249 432 aaPredicted RBP10.98□□□□□ -0.65
SDHD-209ENST00000640554 ETV6P41212 452 aa10.98□□□□□ -0.65
SDHD-209ENST00000640554 PPP5CP53041 499 aa10.98□□□□□ -0.65
SDHD-209ENST00000640554 ZNF45Q02386 682 aa10.98□□□□□ -0.65
SDHD-209ENST00000640554 PYDC2Q56P42 97 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms