RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 A0A1W2PPV4 95 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 HSBP1L1C9JCN9 74 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 SMPD2O60906 423 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 HYPMO75409 117 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 IGLC2P0DOY2 106 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 IGLC3P0DOY3 106 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 ESDP10768 282 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 CD99P14209 185 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 BMP5P22003 454 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 NPPCP23582 126 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 GABRA2P47869 451 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 COMPP49747 757 aaPredicted RBP7.26□□□□□ -1.25
VCL-207ENST00000624354 SPINK9Q5DT21 86 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 TMEM144Q7Z5S9 345 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 C5orf30Q96GV9 206 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 FAM103A1Q9BTL3 118 aaKnown RBP7.26□□□□□ -1.25
VCL-207ENST00000624354 TP53TG3Q9ULZ0 132 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 IGHV2OR16-5A0A0B4J2B6 119 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 MLNRO43193 412 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 CTRLP40313 264 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 AESQ08117 197 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 EIF4EBP1Q13541 118 aaPredicted RBP7.26□□□□□ -1.25
VCL-207ENST00000624354 SLC35E4Q6ICL7 350 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 SEPSECSQ9HD40 501 aaKnown RBP7.26□□□□□ -1.25
VCL-207ENST00000624354 RPH3ALQ9UNE2 315 aa7.26□□□□□ -1.25
VCL-207ENST00000624354 DOCK11Q5JSL3 2073 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 TMPRSS2O15393 492 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 CRYAAP02489 173 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 EGR1P18146 543 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 CD1BP29016 333 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 BRWD1-AS2P59051 145 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 YPEL3P61236 119 aaPredicted RBP7.25□□□□□ -1.25
VCL-207ENST00000624354 FOXL1Q12952 345 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 VAMP3Q15836 100 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 GABRA6Q16445 453 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 ALKBH6Q3KRA9 238 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 TMPRSS7Q7RTY8 843 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 KLHDC1Q8N7A1 406 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 SGMS2Q8NHU3 365 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 SLC25A40Q8TBP6 338 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 CSTL1Q9H114 145 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 OBP2BQ9NPH6 170 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 ELOVL5Q9NYP7 299 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 FBXL7Q9UJT9 491 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 WDR83OSQ9Y284 106 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 TMEM238C9JI98 176 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 MMP23AO75900 390 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 NDUFB4O95168 129 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 TNFSF4P23510 183 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 ATP5G3P48201 142 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 LINC00310P59036 64 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 GNB1P62873 340 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 MORN2Q502X0 79 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 ZNF766Q5HY98 468 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 FAM53AQ6NSI3 398 aaPredicted RBP7.25□□□□□ -1.25
VCL-207ENST00000624354 DHRS13Q6UX07 377 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 NUDT11Q96G61 164 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 KCNIP2Q9NS61 270 aa7.25□□□□□ -1.25
VCL-207ENST00000624354 TRAV30A0A087WSZ9 112 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 TRAV38-1A0A0B4J264 116 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 CELA3BP08861 270 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 PEAR1Q5VY43 1037 aaPredicted RBP7.24□□□□□ -1.25
VCL-207ENST00000624354 RAB1CQ92928 201 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 LOXL4Q96JB6 756 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 HSD17B10Q99714 261 aaKnown RBP7.24□□□□□ -1.25
VCL-207ENST00000624354 SLC35D1Q9NTN3 355 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 DOCK10Q96BY6 2186 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 TLN1Q9Y490 2541 aaKnown RBP7.24□□□□□ -1.25
VCL-207ENST00000624354 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.24□□□□□ -1.25
VCL-207ENST00000624354 MDFIC2A0A1B0GVS7 189 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 C15orf62A8K5M9 175 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 IQCF6A8MYZ5 107 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 MEOX1P50221 254 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 EDDM3BP56851 147 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 TMEM249Q2WGJ8 235 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 LDLRAD2Q5SZI1 272 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 CXorf67Q86X51 503 aaPredicted RBP7.24□□□□□ -1.25
VCL-207ENST00000624354 HES4Q9HCC6 221 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 KLF13Q9Y2Y9 288 aaPredicted RBP7.24□□□□□ -1.25
VCL-207ENST00000624354 PRR14LQ5THK1 2151 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 LINC00473A8K010 186 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 KLRC4-KLRK1H3BQV0 150 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 WNT9BO14905 357 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 C1QTNF9P0C862 333 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 ACP1P24666 158 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 TGFBR3Q03167 851 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 PSG7Q13046 419 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 OCIAD2Q56VL3 154 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 GCSAMLQ5JQS6 135 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 WDR31Q8NA23 367 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 TXNDC17Q9BRA2 123 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 DERL1Q9BUN8 251 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 COL25A1Q9BXS0 654 aaPredicted RBP7.24□□□□□ -1.25
VCL-207ENST00000624354 PSG11Q9UQ72 335 aa7.24□□□□□ -1.25
VCL-207ENST00000624354 IGHV3-43A0A0B4J1X8 118 aa7.23□□□□□ -1.25
VCL-207ENST00000624354 MPDU1O75352 247 aa7.23□□□□□ -1.25
VCL-207ENST00000624354 SP1P08047 785 aa7.23□□□□□ -1.25
VCL-207ENST00000624354 IGHV3-43DP0DP04 118 aa7.23□□□□□ -1.25
VCL-207ENST00000624354 CBLN1P23435 193 aa7.23□□□□□ -1.25
VCL-207ENST00000624354 PDLIM3Q53GG5 364 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms