RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 PAM16Q9Y3D7 125 aa11.65□□□□□ -0.55
CNOT3-210ENST00000618939 TRBV6-6A0A0A6YYG2 114 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 KBTBD11-OT1A0A1B0GTJ5 212 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 IGKV1-5P01602 117 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 BRS3P32247 399 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 ARL16Q0P5N6 197 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 HERPUD1Q15011 391 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 OR2D3Q8NGH3 330 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 OR4C13Q8NGP0 309 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 FOLR2P14207 255 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 ATP5G3P48201 142 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 GAMTQ14353 236 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 LIME1Q9H400 295 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 RPL23P62829 140 aaKnown RBP11.64□□□□□ -0.55
CNOT3-210ENST00000618939 HEPN1Q6WQI6 88 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 TMEM183AQ8IXX5 376 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.64□□□□□ -0.55
CNOT3-210ENST00000618939 HSPB9Q9BQS6 159 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 GSN-AS1Q9NRJ2 163 aa11.64□□□□□ -0.55
CNOT3-210ENST00000618939 DIDO1Q9BTC0 2240 aaKnown RBP11.64□□□□□ -0.55
CNOT3-210ENST00000618939 RRHO14718 337 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 CEACAM1P13688 526 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 ELOBQ15370 118 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 MRPL18Q9H0U6 180 aaKnown RBP11.63□□□□□ -0.55
CNOT3-210ENST00000618939 KIAA1549LQ6ZVL6 1849 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 ZNF318Q5VUA4 2279 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 A0A1B0GW64 132 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 YPEL1O60688 119 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 ATP5IP56385 69 aaPredicted RBP11.63□□□□□ -0.55
CNOT3-210ENST00000618939 MDS2Q8NDY4 140 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 PRSS3P2Q8NHM4 247 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 ZNF596Q8TC21 504 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 YPEL2Q96QA6 119 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 TNFRSF19Q9NS68 423 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 ISLRO14498 428 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 CD40P25942 277 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 DDTP30046 118 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 STARD4Q96DR4 205 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 SLX1AQ9BQ83 275 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 C19orf24Q9BVV8 132 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 MYO7BQ6PIF6 2116 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 C9JQL5 133 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 IGLV3-1P01715 115 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 NUBP1P53384 320 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 LCN2P80188 198 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 FXYD3Q14802 87 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 MORN2Q502X0 79 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 OR9G1Q8NH87 305 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 FAM222BQ8WU58 562 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 GATAD1Q8WUU5 269 aa11.63□□□□□ -0.55
CNOT3-210ENST00000618939 TRAV1-1A0A0B4J248 108 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 C20orf204Q6ZNR8 217 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 TMEM186Q96B77 213 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 WFIKKN1Q96NZ8 548 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 HIGD1AQ9Y241 93 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 TTC28Q96AY4 2481 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 UBE2CO00762 179 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 NDUFA2O43678 99 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 IGHV3-48P01763 117 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 CSN3P07498 182 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 IGFBP2P18065 325 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 NTF4P34130 210 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 Q6P435 159 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 CDX4O14627 284 aaPredicted RBP11.62□□□□□ -0.55
CNOT3-210ENST00000618939 DUTP33316 252 aaKnown RBP11.62□□□□□ -0.55
CNOT3-210ENST00000618939 NPIPB3Q92617 1050 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 NAGKQ9UJ70 344 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 CADP27708 2225 aa11.62□□□□□ -0.55
CNOT3-210ENST00000618939 IGHV1-18A0A0C4DH31 117 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 CORTO00230 105 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 FOXF2Q12947 444 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 OSR1Q8TAX0 266 aaPredicted RBP11.61□□□□□ -0.55
CNOT3-210ENST00000618939 GUCD1Q96NT3 240 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 PGPA6NDG6 321 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HLA-DQA1P01909 254 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 RPL30P62888 115 aaKnown RBP11.61□□□□□ -0.55
CNOT3-210ENST00000618939 CENPWQ5EE01 88 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 Q6ZN92 141 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 IGKV1-6A0A0C4DH72 117 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 C5orf52A6NGY3 159 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 SSX7Q7RTT5 188 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 RNF138Q8WVD3 245 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 WDR83OSQ9Y284 106 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 SCO2A0A1W2PP80 73 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 GRIFINA4D1Z8 144 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 DIRC3C9JPN6 131 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 CCL21O00585 134 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 TM4SF5O14894 197 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 RBFOX2O43251 390 aaKnown RBP eCLIP11.61□□□□□ -0.559e-17■■■■□ 22.8
CNOT3-210ENST00000618939 HIST1H2BKO60814 126 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 CGAP01215 116 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HIST1H2BJP06899 126 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HIST1H2BOP23527 126 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HIST1H2BBP33778 126 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HIST1H2BDP58876 126 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HIST1H2BCP62807 126 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HIST2H2BEQ16778 126 aa11.61□□□□□ -0.55
CNOT3-210ENST00000618939 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms