RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 IGKV1-5P01602 117 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 HLA-DRB1P01911 266 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 DCAF10Q5QP82 559 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 TMPRSS2O15393 492 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 RAMP3O60896 148 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 PLAUP00749 431 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 UQCRFS1P47985 274 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 TDGF1P3P51864 188 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 TNXAQ16473 311 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 GCSAMLQ5JQS6 135 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 PCSK4Q6UW60 755 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 FGFBP3Q8TAT2 258 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 ALKBH7Q9BT30 221 aaPredicted RBP12.33□□□□□ -0.44
VPS36-207ENST00000611132 ZFP30Q9Y2G7 519 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 CACNA1EQ15878 2313 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 J3QW42 95 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 TIMP3P35625 211 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 CA7P43166 264 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 TMEM14EPQ6UXP3 125 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 C5orf17Q8NAS9 161 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 KLF14Q8TD94 323 aaPredicted RBP12.33□□□□□ -0.44
VPS36-207ENST00000611132 CEP250Q9BV73 2442 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 DENND4CQ5VZ89 1909 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 A0A0G2JRQ6 117 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 K7ESF4 209 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 EAF1Q96JC9 268 aaPredicted RBP12.32□□□□□ -0.44
VPS36-207ENST00000611132 IMMP1LQ96LU5 166 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 COL25A1Q9BXS0 654 aaPredicted RBP12.32□□□□□ -0.44
VPS36-207ENST00000611132 SNHG12Q9BXW3 62 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 CALYQ9NYX4 217 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 THSD7BQ9C0I4 1608 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 DIDO1Q9BTC0 2240 aaKnown RBP12.32□□□□□ -0.44
VPS36-207ENST00000611132 LRRK1Q38SD2 2015 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 WNT9BO14905 357 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 ZNF324O75467 553 aaPredicted RBP12.32□□□□□ -0.44
VPS36-207ENST00000611132 TMEM50AO95807 157 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 GNB2P62879 340 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 UBALD2Q8IYN6 164 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 GCSAMQ8N6F7 178 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 PPIHO43447 177 aaKnown RBP12.32□□□□□ -0.44
VPS36-207ENST00000611132 NUDT3O95989 172 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 LGALS4P56470 323 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 CDPF1Q6NVV7 123 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 PGLYRP4Q96LB8 373 aa12.32□□□□□ -0.44
VPS36-207ENST00000611132 DOCK8Q8NF50 2099 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 ZNF716A6NP11 495 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 HYPMO75409 117 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 IGFBP2P18065 325 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 ZNF146Q15072 292 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 ASCL4Q6XD76 172 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 Q6ZS49 121 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 ZNF430Q9H8G1 570 aaPredicted RBP12.31□□□□□ -0.44
VPS36-207ENST00000611132 CFHR1Q03591 330 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 TMEM177Q53S58 311 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 MRPL32Q9BYC8 188 aaKnown RBP12.31□□□□□ -0.44
VPS36-207ENST00000611132 CHODLQ9H9P2 273 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 PTPRZ1P23471 2315 aaPredicted RBP12.31□□□□□ -0.44
VPS36-207ENST00000611132 OR4C46A6NHA9 309 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 DLL1O00548 723 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 CD33P20138 364 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 FOXA3P55318 350 aaPredicted RBP12.31□□□□□ -0.44
VPS36-207ENST00000611132 ZNF497Q6ZNH5 498 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 GNB1LQ9BYB4 327 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 SEMA5BQ9P283 1151 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 ZNF207O43670 478 aaKnown RBP12.31□□□□□ -0.44
VPS36-207ENST00000611132 MRPL14Q6P1L8 145 aaKnown RBP12.31□□□□□ -0.44
VPS36-207ENST00000611132 MRPL52Q86TS9 123 aaKnown RBP12.31□□□□□ -0.44
VPS36-207ENST00000611132 ELOVL5Q9NYP7 299 aa12.31□□□□□ -0.44
VPS36-207ENST00000611132 ACP1P24666 158 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 DHRS13Q6UX07 377 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 Q6ZRM9 215 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 BMPERQ8N8U9 685 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 RNASE7Q9H1E1 156 aaKnown RBP12.3□□□□□ -0.44
VPS36-207ENST00000611132 ASCL3Q9NQ33 180 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 A0A0G2JMM0 328 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 A0A1W2PPB8 328 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 A0A1W2PRS3 328 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 KIR3DP1A8MWS1 328 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 RPL8P62917 257 aaKnown RBP12.3□□□□□ -0.44
VPS36-207ENST00000611132 RPL39P5Q59GN2 51 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 BHLHA15Q7RTS1 189 aaPredicted RBP12.3□□□□□ -0.44
VPS36-207ENST00000611132 PRNTQ86SH4 94 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 SAP25Q8TEE9 199 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 DERL1Q9BUN8 251 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 C21orf140B9A014 251 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 MIR17HGQ75NE6 70 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 ST6GALNAC3Q8NDV1 305 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 HBBP68871 147 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 GRAMD2BQ96HH9 432 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 SGK494Q96LW2 274 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 ARRDC1-AS1Q9H2J1 176 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 OSTCQ9NRP0 149 aa12.3□□□□□ -0.44
VPS36-207ENST00000611132 PEF1Q9UBV8 284 aaKnown RBP12.3□□□□□ -0.44
VPS36-207ENST00000611132 IZUMO1RA6ND01 250 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 LIPFP07098 398 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 NMUP48645 174 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 ATP5IP56385 69 aaPredicted RBP12.29□□□□□ -0.44
VPS36-207ENST00000611132 OR13A1Q8NGR1 328 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 LEAP2Q969E1 77 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 ST6GALNAC6Q969X2 333 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms