RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 NSG2Q9Y328 171 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 ST8SIA3O43173 380 aa13.31□□□□□ -0.28
CDK5RAP3-215ENST00000579780 HLA-DRB1P01911 266 aa13.31□□□□□ -0.28
CDK5RAP3-215ENST00000579780 PET100P0DJ07 73 aa13.31□□□□□ -0.28
CDK5RAP3-215ENST00000579780 TNFRSF9Q07011 255 aa13.31□□□□□ -0.28
CDK5RAP3-215ENST00000579780 LY6EQ16553 131 aa13.31□□□□□ -0.28
CDK5RAP3-215ENST00000579780 C5orf56Q8N8D9 126 aa13.31□□□□□ -0.28
CDK5RAP3-215ENST00000579780 OR2T35Q8NGX2 323 aa13.31□□□□□ -0.28
CDK5RAP3-215ENST00000579780 WDR89Q96FK6 387 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-215ENST00000579780 TET2Q6N021 2002 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 NSD1Q96L73 2696 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 TNCP24821 2201 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 INAFM1C9JVW0 142 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 HOXA3O43365 443 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 PFDN1O60925 122 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 SCGB1D2O95969 90 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 CA2P00918 260 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 MBPP02686 304 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 SPCS3P61009 180 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 ID3Q02535 119 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 FGL1Q08830 312 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 RAB32Q13637 225 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 RBMS3Q6XE24 437 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 COMMD5Q9GZQ3 224 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 RCL1Q9Y2P8 373 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 OR51B2Q9Y5P1 312 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 MXRA5Q9NR99 2828 aa13.3□□□□□ -0.28
CDK5RAP3-215ENST00000579780 G3V3Q6 166 aa13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 K7EPK0 472 aa13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 CHST1O43916 411 aa13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 MED6O75586 246 aa13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 ACTL6BO94805 426 aa13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 MPC2O95563 127 aa13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 COMPP49747 757 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 S100A10P60903 97 aa13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 HSPE1P61604 102 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 PRCDQ00LT1 54 aa13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 CXorf66Q5JRM2 361 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 OR1L8Q8NGR8 309 aa13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 RASL11BQ9BPW5 248 aa13.29□□□□□ -0.28
CDK5RAP3-215ENST00000579780 CLDN34H7C241 214 aa13.28□□□□□ -0.28
CDK5RAP3-215ENST00000579780 WRBO00258 174 aa13.28□□□□□ -0.28
CDK5RAP3-215ENST00000579780 NXPH3O95157 252 aa13.28□□□□□ -0.28
CDK5RAP3-215ENST00000579780 PSMB6P28072 239 aa13.28□□□□□ -0.28
CDK5RAP3-215ENST00000579780 RPL27AP46776 148 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-215ENST00000579780 SSBP2P81877 361 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-215ENST00000579780 PJVKQ0ZLH3 352 aa13.28□□□□□ -0.28
CDK5RAP3-215ENST00000579780 TNXAQ16473 311 aa13.28□□□□□ -0.28
CDK5RAP3-215ENST00000579780 LRRC37A5PQ49AS3 106 aa13.28□□□□□ -0.28
CDK5RAP3-215ENST00000579780 MTORP42345 2549 aa13.28□□□□□ -0.28
CDK5RAP3-215ENST00000579780 TRAV14DV4A0A0A6YYC5 116 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 DNAJC9-AS1A6NH13 148 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SYNGR2O43760 224 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 DEDDO75618 318 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 LY86O95711 162 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 IFNA17P01571 189 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 AMY1AP04745 511 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 FAM157CP0CG43 387 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 POLR2GP62487 172 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 CD300CQ08708 224 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 C10orf55Q5SWW7 151 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 PRSS54Q6PEW0 395 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 Q71RC1 249 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ZNF418Q8TF45 676 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SRSF12Q8WXF0 261 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 RAB40CQ96S21 281 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 CLCC1Q96S66 551 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 NDUFA4L2Q9NRX3 87 aa13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 LSM5Q9Y4Y9 91 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-215ENST00000579780 TEX50A0A1B0GTY4 177 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 A0A1W2PN81 502 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 INS-IGF2F8WCM5 200 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 FCN1O00602 326 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SSSCA1O60232 199 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 CRLF1O75462 422 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 C1QBP02746 253 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 LYL1P12980 280 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 MYOD1P15172 320 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 PVALBP20472 110 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 CHRNA7P36544 502 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 HOXA1P49639 335 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 GNB1P62873 340 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ZNF562Q6V9R5 426 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 MRPL41Q8IXM3 137 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 ARPC1AQ92747 370 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 CIB3Q96Q77 187 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SRSF8Q9BRL6 282 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 MAGT1Q9H0U3 335 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 RBKSQ9H477 322 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 C11orf1Q9H5F2 150 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 PLEKHA3Q9HB20 300 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 MBD2Q9UBB5 411 aa13.26□□□□□ -0.29
CDK5RAP3-215ENST00000579780 IGHV7-81A0A0B4J1V7 117 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 CEBPZOSA8MTT3 80 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 H0YIZ8 118 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SMLR1H3BR10 107 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 RLN2P04090 185 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 SLC25A4P12235 298 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 HILS1P60008 231 aa13.25□□□□□ -0.29
CDK5RAP3-215ENST00000579780 CX3CL1P78423 397 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms