RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SPINK4O60575 86 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 IER3P46695 156 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 KRTCAP3Q53RY4 240 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 C1orf229Q6ZS94 237 aaPredicted RBP14.42□□□□□ -0.1
SCARF1-205ENST00000571272 Q6ZT83 130 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 FAM214BQ7L5A3 538 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 OR4P4Q8NGL7 312 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 HSPB9Q9BQS6 159 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 TXNDC17Q9BRA2 123 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 HINT2Q9BX68 163 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 IL36BQ9NZH7 164 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 CECR9P0C854 216 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 AARDQ4LEZ3 155 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 VWA1Q6PCB0 445 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 ZNRF1Q8ND25 227 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 TECTAO75443 2155 aa14.42□□□□□ -0.1
SCARF1-205ENST00000571272 FCN1O00602 326 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 MYOD1P15172 320 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 CDKN1AP38936 164 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 BAGE3Q86Y29 109 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 BAGE2Q86Y30 109 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 OR2Z1Q8NG97 314 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 OR1L6Q8NGR2 347 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 FER1L6-AS2Q96M78 137 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 LSM4Q9Y4Z0 139 aaKnown RBP14.41□□□□□ -0.1
SCARF1-205ENST00000571272 IGKV1D-17A0A075B6S4 117 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 CGAP01215 116 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 IGKV3-15P01624 115 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 RAB4AP20338 218 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 TDGF1P3P51864 188 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 TPPP2P59282 170 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 CYB5R2Q6BCY4 276 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
SCARF1-205ENST00000571272 PARD6AQ9NPB6 346 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 PAM16Q9Y3D7 125 aa14.41□□□□□ -0.1
SCARF1-205ENST00000571272 INTS1Q8N201 2190 aaKnown RBP14.4□□□□□ -0.1
SCARF1-205ENST00000571272 TMPRSS3P57727 454 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 TEPPQ6URK8 271 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 SELENOTP62341 195 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 RHOBP62745 196 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 FAM90A1Q86YD7 464 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 OR52E5Q8NH55 327 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 VN1R17PQ8TDU5 208 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 FAM122AQ96E09 287 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 IFI27L2Q9H2X8 130 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 SNURFLB1AK76 121 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 ZNF25P17030 456 aaPredicted RBP14.4□□□□□ -0.1
SCARF1-205ENST00000571272 IGFBP2P18065 325 aa14.4□□□□□ -0.1
SCARF1-205ENST00000571272 EAF1Q96JC9 268 aaPredicted RBP14.4□□□□□ -0.1
SCARF1-205ENST00000571272 LNP1A1A4G5 178 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 FAM90A9PA6NNJ1 464 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 YPEL1O60688 119 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 TPTE2P1Q5T6R2 138 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 MIR17HGQ75NE6 70 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 MMD2Q8IY49 270 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 OR8I2Q8N0Y5 310 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 YPEL2Q96QA6 119 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 SAMD10Q9BYL1 202 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 JPT1Q9UK76 154 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 AHRRA9YTQ3 701 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 NPY1RP25929 384 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 LOXL3P58215 753 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 SLC35B1P78383 322 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 TRAT1Q6PIZ9 186 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 DHRS13Q6UX07 377 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 CLCF1Q9UBD9 225 aa14.39□□□□□ -0.11
SCARF1-205ENST00000571272 LGALS4P56470 323 aa14.38□□□□□ -0.11
SCARF1-205ENST00000571272 SPRNQ5BIV9 151 aa14.38□□□□□ -0.11
SCARF1-205ENST00000571272 SLC24A4Q8NFF2 622 aa14.38□□□□□ -0.11
SCARF1-205ENST00000571272 FAM103A1Q9BTL3 118 aaKnown RBP14.38□□□□□ -0.11
SCARF1-205ENST00000571272 A6NNC1 897 aa14.38□□□□□ -0.11
SCARF1-205ENST00000571272 A8MXE2 369 aa14.38□□□□□ -0.11
SCARF1-205ENST00000571272 CA2P00918 260 aa14.38□□□□□ -0.11
SCARF1-205ENST00000571272 PAFAH1B2P68402 229 aa14.38□□□□□ -0.11
SCARF1-205ENST00000571272 TMEM178AQ8NBL3 297 aa14.38□□□□□ -0.11
SCARF1-205ENST00000571272 UHRF2Q96PU4 802 aa14.38□□□□□ -0.11
SCARF1-205ENST00000571272 CRYBB3P26998 211 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 RPEL1Q2QD12 228 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 MOB3BQ86TA1 216 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 DOLPP1Q86YN1 238 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 ST6GALNAC3Q8NDV1 305 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 OR5AU1Q8NGC0 362 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 FAM216AQ8WUB2 273 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 LRFN3Q9BTN0 628 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 OPN3Q9H1Y3 402 aaPredicted RBP14.37□□□□□ -0.11
SCARF1-205ENST00000571272 TMEM265A0A087WTH1 108 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 C15orf61A6NNL5 157 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 KIR2DL2P43627 348 aaPredicted RBP14.37□□□□□ -0.11
SCARF1-205ENST00000571272 PSG5Q15238 335 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 KIAA1644Q3SXP7 199 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 OR4A47Q6IF82 309 aa14.37□□□□□ -0.11
SCARF1-205ENST00000571272 MT-CO2P00403 227 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 IRF2P14316 349 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 GATA2P23769 480 aaPredicted RBP14.36□□□□□ -0.11
SCARF1-205ENST00000571272 FAM201AQ5SY85 155 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 RNASE7Q9H1E1 156 aaKnown RBP14.36□□□□□ -0.11
SCARF1-205ENST00000571272 V9GYV3 84 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 TRGV10A0A0A0MS01 117 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 MGST3O14880 152 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 RANP62826 216 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 253.5 ms