RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 G6PCP35575 357 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 RAB25P57735 213 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 TNXAQ16473 311 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 MRGPRG-AS1Q2M3A8 158 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 SP6Q3SY56 376 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 HSD17B13Q7Z5P4 300 aaPredicted RBP13.14□□□□□ -0.31
CLN6-208ENST00000567060 OR4X2Q8NGF9 303 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 OR5B3Q8NH48 314 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 SRSF12Q8WXF0 261 aaKnown RBP13.14□□□□□ -0.31
CLN6-208ENST00000567060 CLCC1Q96S66 551 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 COMMD5Q9GZQ3 224 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 SHPKQ9UHJ6 478 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 NBEAL2Q6ZNJ1 2754 aa13.14□□□□□ -0.31
CLN6-208ENST00000567060 TRAV41A0A0B4J266 112 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 ARPC1BO15143 372 aaKnown RBP13.13□□□□□ -0.31
CLN6-208ENST00000567060 BRI3O95415 125 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 ELANEP08246 267 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 P0C879 139 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 VAMP1P23763 118 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 NDPQ00604 133 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 CFHR3Q02985 330 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 PJVKQ0ZLH3 352 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 PPP1R1AQ13522 171 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 TMEM95Q3KNT9 176 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 HIST2H2BDQ6DRA6 164 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 TEX38Q6PEX7 206 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 ZNF429Q86V71 674 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 SELENOHQ8IZQ5 122 aaKnown RBP13.13□□□□□ -0.31
CLN6-208ENST00000567060 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 OR5M8Q8NGP6 311 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 NUDT15Q9NV35 164 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 ZNF257Q9Y2Q1 563 aa13.13□□□□□ -0.31
CLN6-208ENST00000567060 LINC01548A6NM66 108 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 C15orf61A6NNL5 157 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 H3BUA1 57 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 DUS4LO95620 317 aaKnown RBP13.12□□□□□ -0.31
CLN6-208ENST00000567060 IGHG4P01861 327 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 HLA-AP01891 365 aaKnown RBP13.12□□□□□ -0.31
CLN6-208ENST00000567060 H2AFB2P0C5Z0 115 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 OR4E1P0C645 316 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 PPIFP30405 207 aaKnown RBP13.12□□□□□ -0.31
CLN6-208ENST00000567060 RPL27AP46776 148 aaKnown RBP13.12□□□□□ -0.31
CLN6-208ENST00000567060 GNB1P62873 340 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 SSBP2P81877 361 aaPredicted RBP13.12□□□□□ -0.31
CLN6-208ENST00000567060 C19orf54Q5BKX5 351 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 TMEM268Q5VZI3 342 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 PLET1Q6UQ28 207 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 LYG2Q86SG7 212 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 MRPL41Q8IXM3 137 aaKnown RBP13.12□□□□□ -0.31
CLN6-208ENST00000567060 OR5AU1Q8NGC0 362 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 OR4A16Q8NH70 328 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 RNASE11Q8TAA1 199 aaKnown RBP13.12□□□□□ -0.31
CLN6-208ENST00000567060 ABHD5Q8WTS1 349 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 CITED1Q99966 193 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 TMEM14BQ9NUH8 114 aa13.12□□□□□ -0.31
CLN6-208ENST00000567060 FOXA2Q9Y261 457 aaPredicted RBP13.12□□□□□ -0.31
CLN6-208ENST00000567060 C9orf170A2RU37 121 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 PTTG1O95997 202 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 OPN1MWP04001 364 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 OPN1MW2P0DN77 364 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 OPN1MW3P0DN78 364 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 EGR2P11161 476 aaPredicted RBP13.11□□□□□ -0.31
CLN6-208ENST00000567060 KRTAP10-3P60369 221 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 DHRS2Q13268 280 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 FOXE3Q13461 319 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 DCTN2Q13561 401 aaKnown RBP13.11□□□□□ -0.31
CLN6-208ENST00000567060 C4orf46Q504U0 113 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 UNQ5815/PRO19632Q6UWF5 114 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 RNF152Q8N8N0 203 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 OR1L8Q8NGR8 309 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 COQ8AQ8NI60 647 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 GRPEL2Q8TAA5 225 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 NOL4LQ96MY1 436 aaPredicted RBP13.11□□□□□ -0.31
CLN6-208ENST00000567060 COA4Q9NYJ1 87 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 FLVCR2Q9UPI3 526 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 TMED3Q9Y3Q3 217 aa13.11□□□□□ -0.31
CLN6-208ENST00000567060 PRAF2O60831 178 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 FBXO24O75426 580 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 IGKV1-5P01602 117 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 IL5P05113 134 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 SLC25A6P12236 298 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 AARDQ4LEZ3 155 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 NRARPQ7Z6K4 114 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 LHFPL5Q8TAF8 219 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 PHB2Q99623 299 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 QTRT1Q9BXR0 403 aaKnown RBP13.1□□□□□ -0.31
CLN6-208ENST00000567060 SLA2Q9H6Q3 261 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 ZFP57Q9NU63 452 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 FBXO7Q9Y3I1 522 aa13.1□□□□□ -0.31
CLN6-208ENST00000567060 MSGN1A6NI15 193 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 IGLV1-40P01703 118 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 OR9G9P0C7N8 305 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 ANXA7P20073 488 aaKnown RBP13.09□□□□□ -0.31
CLN6-208ENST00000567060 OR2B8PP59922 312 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 ECSCRQ19T08 205 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 CXorf66Q5JRM2 361 aaPredicted RBP13.09□□□□□ -0.31
CLN6-208ENST00000567060 SLC35G3Q8N808 338 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 LFNGQ8NES3 379 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 OR52E5Q8NH55 327 aa13.09□□□□□ -0.31
CLN6-208ENST00000567060 MITD1Q8WV92 249 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms