RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CASTOR1Q8WTX7 329 aa10.74□□□□□ -0.69
HERPUD1-210ENST00000565966 SDHCQ99643 169 aaPredicted RBP10.74□□□□□ -0.69
HERPUD1-210ENST00000565966 RTBDNQ9BSG5 229 aaPredicted RBP10.74□□□□□ -0.69
HERPUD1-210ENST00000565966 MCRIP2Q9BUT9 160 aaKnown RBP10.74□□□□□ -0.69
HERPUD1-210ENST00000565966 GNB4Q9HAV0 340 aa10.74□□□□□ -0.69
HERPUD1-210ENST00000565966 TMEM140Q9NV12 185 aa10.74□□□□□ -0.69
HERPUD1-210ENST00000565966 MCUBQ9NWR8 336 aa10.74□□□□□ -0.69
HERPUD1-210ENST00000565966 COPZ2Q9P299 210 aa10.74□□□□□ -0.69
HERPUD1-210ENST00000565966 SCP2D1Q9UJQ7 156 aa10.74□□□□□ -0.69
HERPUD1-210ENST00000565966 GPR132Q9UNW8 380 aa10.74□□□□□ -0.69
HERPUD1-210ENST00000565966 E7EUB6 86 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 H3BUA1 57 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 WIPF1O43516 503 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 KRASP01116 189 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 IGKV1-39P01597 117 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 IGKV1D-39P04432 117 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 APELAP0DMC3 54 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 MYOD1P15172 320 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 HLA-GP17693 338 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 FAUP35544 74 aaKnown RBP10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 G6PCP35575 357 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 RPL27AP46776 148 aaKnown RBP10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 ERVK-16P61578 105 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 PDLIM3Q53GG5 364 aaPredicted RBP10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 CCDC71LQ8N9Z2 235 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 MS4A10Q96PG2 267 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 TP53RKQ96S44 253 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 PHB2Q99623 299 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 SPIN2AQ99865 258 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 SPIN2BQ9BPZ2 258 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 GPR61Q9BZJ8 451 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 C5orf66Q9H5L9 145 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 BATF3Q9NR55 127 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 ZNF355PQ9NSJ1 428 aa10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 C14orf166Q9Y224 244 aaKnown RBP10.73□□□□□ -0.69
HERPUD1-210ENST00000565966 C3orf85A0A1B0GTC6 90 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 A0A1B0GW64 132 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 CGB1A6NKQ9 187 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 TEX22C9J3V5 150 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 H0Y980 276 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 BRI3O95415 125 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 TRGV3P03979 118 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 RAB25P57735 213 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 TPPP2P59282 170 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 ZNF45Q02386 682 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 FHL3Q13643 280 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 CADM3Q8N126 398 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 OR1N2Q8NGR9 330 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 DEDD2Q8WXF8 326 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 SEC22AQ96IW7 307 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 OR5B12Q96R08 314 aa10.72□□□□□ -0.69
HERPUD1-210ENST00000565966 HMX3A6NHT5 357 aa10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 SERPINE2P07093 398 aa10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 FGF2P09038 288 aa10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 LGALS1P09382 135 aaKnown RBP10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 OR8U8P0C7N1 319 aa10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 OR9G9P0C7N8 305 aa10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 ZNF616Q08AN1 781 aa10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 SP6Q3SY56 376 aa10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 TRIQKQ629K1 86 aa10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 ZNF57Q68EA5 555 aaPredicted RBP10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 ADAD2Q8NCV1 583 aaKnown RBP10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 DPF1Q92782 380 aa10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 FYTTD1Q96QD9 318 aaKnown RBP10.71□□□□□ -0.69
HERPUD1-210ENST00000565966 A0A0G2JLM5 398 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 CRYM-AS1A6NIL9 109 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 UCP1P25874 307 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 OR2B8PP59922 312 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 LINC00299Q6ZSB3 139 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 REC114Q7Z4M0 266 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 TTC9CQ8N5M4 171 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 TMEM230Q96A57 120 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 SCGB3A2Q96PL1 93 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 NAA60Q9H7X0 242 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 AKIP1Q9NQ31 210 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 COA4Q9NYJ1 87 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 NSG2Q9Y328 171 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 SORL1Q92673 2214 aa10.7□□□□□ -0.7
HERPUD1-210ENST00000565966 TEX13DA0A0J9YY54 714 aaPredicted RBP10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 C13orf42A0A1B0GVH6 325 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 LINC01619G3V211 115 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 B3GALNT1O75752 331 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 SNAPC5O75971 98 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 IGKV1-5P01602 117 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 IGHV3-11P01762 117 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 OR5AC1P0C628 307 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 IL7P13232 177 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 AREGP15514 252 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 INPP1P49441 399 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 TRIM16LQ309B1 348 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 H2BFWTQ7Z2G1 175 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 SLC25A42Q86VD7 318 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 COMMD5Q9GZQ3 224 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 ALX4Q9H161 411 aaPredicted RBP10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 PTTG2Q9NZH5 202 aa10.69□□□□□ -0.7
HERPUD1-210ENST00000565966 TEX50A0A1B0GTY4 177 aa10.68□□□□□ -0.7
HERPUD1-210ENST00000565966 DBX1A6NMT0 343 aa10.68□□□□□ -0.7
HERPUD1-210ENST00000565966 NPIPB5A8MRT5 1133 aa10.68□□□□□ -0.7
HERPUD1-210ENST00000565966 RBMXL2O75526 392 aaKnown RBP10.68□□□□□ -0.7
HERPUD1-210ENST00000565966 PRH1P02810 166 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms