RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SLC25A24Q6NUK1 477 aa11.15□□□□□ -0.62
TPM1-215ENST00000558868 TEX45Q8NA69 505 aa11.15□□□□□ -0.62
TPM1-215ENST00000558868 OR10P1Q8NGE3 313 aa11.15□□□□□ -0.62
TPM1-215ENST00000558868 TMEM167AQ8TBQ9 72 aa11.15□□□□□ -0.62
TPM1-215ENST00000558868 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
TPM1-215ENST00000558868 SAT2Q96F10 170 aaPredicted RBP11.15□□□□□ -0.62
TPM1-215ENST00000558868 PERPQ96FX8 193 aa11.15□□□□□ -0.62
TPM1-215ENST00000558868 PARD6GQ9BYG4 376 aaPredicted RBP11.15□□□□□ -0.62
TPM1-215ENST00000558868 AUP1Q9Y679 476 aa11.15□□□□□ -0.62
TPM1-215ENST00000558868 FBXO24O75426 580 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 SPP1P10451 314 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 CD1BP29016 333 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 VDAC2P45880 294 aaPredicted RBP11.14□□□□□ -0.63
TPM1-215ENST00000558868 SULT1A2P50226 295 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 RPL8P62917 257 aaKnown RBP11.14□□□□□ -0.63
TPM1-215ENST00000558868 BLOC1S1P78537 153 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 SLC38A11Q08AI6 406 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 ZNF787Q6DD87 383 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 HCP5Q6MZN7 132 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 COMMD7Q86VX2 200 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 OR4C12Q96R67 309 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 PLEKHA3Q9HB20 300 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 TBL2Q9Y4P3 447 aaKnown RBP11.14□□□□□ -0.63
TPM1-215ENST00000558868 NF1P21359 2839 aa11.14□□□□□ -0.63
TPM1-215ENST00000558868 CSMD1Q96PZ7 3565 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 IFNA10P01566 189 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 OR8U8P0C7N1 319 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 HOXB4P17483 251 aaPredicted RBP11.13□□□□□ -0.63
TPM1-215ENST00000558868 UBE2E1P51965 193 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 DLX1P56177 255 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 PRCDQ00LT1 54 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 SPINK9Q5DT21 86 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 OR8G2PQ6IF36 304 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 MRPL41Q8IXM3 137 aaKnown RBP11.13□□□□□ -0.63
TPM1-215ENST00000558868 HSD17B11Q8NBQ5 300 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 OR1L8Q8NGR8 309 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 PCNPQ8WW12 178 aaKnown RBP11.13□□□□□ -0.63
TPM1-215ENST00000558868 TMEM147Q9BVK8 224 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 GGACTQ9BVM4 153 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 LPAR2Q9HBW0 351 aa11.13□□□□□ -0.63
TPM1-215ENST00000558868 BEX4Q9NWD9 120 aaPredicted RBP11.13□□□□□ -0.63
TPM1-215ENST00000558868 IGHV4-61A0A0C4DH41 118 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 TEX50A0A1B0GTY4 177 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 A0A1W2PN81 502 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 A0A1W2PPI3 338 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 C15orf62A8K5M9 175 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 ZNF705EA8MWA4 302 aaPredicted RBP11.12□□□□□ -0.63
TPM1-215ENST00000558868 NUDT19A8MXV4 375 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 UMAD1C9J7I0 102 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 TRIM77I1YAP6 450 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 FAM157CP0CG43 387 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 MAS1LP35410 378 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 CHRNA7P36544 502 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 F2RL1P55085 397 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 KLRD1Q13241 179 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 KRTAP21-3Q3LHN1 58 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 MMD2Q8IY49 270 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 MMP26Q9NRE1 261 aa11.12□□□□□ -0.63
TPM1-215ENST00000558868 IGHV4-30-2A0A087WSY4 118 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 IGHV3-72A0A0B4J1Y9 119 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 FAM157AC9JC47 383 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 INS-IGF2F8WCM5 200 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 RNASEK-C17orf49H0YIS7 233 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 ATP6V0CP27449 155 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 ERHP84090 104 aaKnown RBP11.11□□□□□ -0.63
TPM1-215ENST00000558868 PRB3Q04118 309 aaPredicted RBP11.11□□□□□ -0.63
TPM1-215ENST00000558868 ARL16Q0P5N6 197 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 HABP2Q14520 560 aaPredicted RBP11.11□□□□□ -0.63
TPM1-215ENST00000558868 CLEC12BQ2HXU8 276 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 LRRC75BQ2VPJ9 315 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 HAPLN4Q86UW8 402 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 LRRC75A-AS1Q8N1F1 130 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 SLC24A4Q8NFF2 622 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 OR2G3Q8NGZ4 309 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 MALSU1Q96EH3 234 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 CXorf58Q96LI9 332 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 HINT2Q9BX68 163 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 UQCC1Q9NVA1 299 aa11.11□□□□□ -0.63
TPM1-215ENST00000558868 PMS2P5A8MQ11 134 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 TIMM23O14925 209 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 SLC25A17O43808 307 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 ACTL6BO94805 426 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 NPY1RP25929 384 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 PAX8Q06710 450 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 PSG5Q15238 335 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 DPPA3Q6W0C5 159 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 ETV3LQ6ZN32 361 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 CITED4Q96RK1 184 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 TBX15Q96SF7 602 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 PSMG3Q9BT73 122 aaPredicted RBP11.1□□□□□ -0.63
TPM1-215ENST00000558868 PARP11Q9NR21 331 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 NDUFA4L2Q9NRX3 87 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 TIMM9Q9Y5J7 89 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 HILPDAQ9Y5L2 63 aa11.1□□□□□ -0.63
TPM1-215ENST00000558868 VENTXO95231 258 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 MOSP00540 346 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 PRH1P02810 166 aa11.09□□□□□ -0.63
TPM1-215ENST00000558868 IFNA4P05014 189 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms