RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 COL12A1Q99715 3063 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 LAMTOR5O43504 91 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 CD46P15529 392 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 PRB3Q04118 309 aaPredicted RBP14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 VWA1Q6PCB0 445 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 MIR17HGQ75NE6 70 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 NAT8BQ9UHF3 227 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 KMT2EQ8IZD2 1858 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 CEP295Q9C0D2 2601 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 ANKRD11Q6UB99 2663 aaPredicted RBP14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 TGOLN2O43493 480 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 OR7C2O60412 319 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 PLAUP00749 431 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 IGFBP2P18065 325 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 TGIF2LYQ8IUE0 185 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 RNASEH2CQ8TDP1 164 aaKnown RBP14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 RND1Q92730 232 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 ARRDC1-AS1Q9H2J1 176 aa14.15□□□□□ -0.14
PPP4R3A-208ENST00000555462 TNRC6AQ8NDV7 1962 aaKnown RBP14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 SOX8P57073 446 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 HTD2P86397 168 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 DBX2Q6ZNG2 339 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 PQLC2Q6ZP29 291 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 Q8N7P7 452 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 PKIBQ9C010 78 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 MBNL3Q9NUK0 354 aaKnown RBP14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 RPH3ALQ9UNE2 315 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 SELENOKQ9Y6D0 94 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 CD24P25063 80 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 PSG5Q15238 335 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 PRR27Q6MZM9 219 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 ST6GALNAC3Q8NDV1 305 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 AGMATQ9BSE5 352 aa14.14□□□□□ -0.15
PPP4R3A-208ENST00000555462 MBP02144 154 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 LINC00310P59036 64 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 ERVK11-1P61568 191 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 DMRTA1Q5VZB9 504 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 LCN12Q6JVE5 192 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 CD177Q8N6Q3 437 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 RCHY1Q96PM5 261 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 LINC00470Q9BZP3 86 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 CER1O95813 267 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 TDGF1P3P51864 188 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 MMDQ15546 238 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 OOEPA6NGQ2 149 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 SRSF7Q16629 238 aaKnown RBP eCLIP14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 ZCCHC14Q8WYQ9 949 aaKnown RBP14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 TMEM208Q9BTX3 173 aa14.13□□□□□ -0.15
PPP4R3A-208ENST00000555462 TRGV5A0A0B4J1U4 118 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 SRP14P37108 136 aaKnown RBP14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 DUSP3P51452 185 aaPredicted RBP14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 C11orf53Q8IXP5 236 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 GGTLC1Q9BX51 225 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 TRBV6-6A0A0A6YYG2 114 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 H3BTX0 84 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 SPRY3O43610 288 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 SS18L1O75177 396 aaPredicted RBP14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 SP1P08047 785 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 AMTP48728 403 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 ZNF146Q15072 292 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 WDR82Q6UXN9 313 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 STPG3Q8N7X2 389 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 TMEM106BQ9NUM4 274 aa14.12□□□□□ -0.15
PPP4R3A-208ENST00000555462 CCL11P51671 97 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 SUMO1P63165 101 aaKnown RBP14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 MRPL49Q13405 166 aaKnown RBP14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 MOB1BQ7L9L4 216 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 VAMP8Q9BV40 100 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 HIPK2Q9H2X6 1198 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 TMEM140Q9NV12 185 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 WDR83OSQ9Y284 106 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 AKAP13Q12802 2813 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 OR10J1P30954 320 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 REG1BP48304 166 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 ACP7Q6ZNF0 438 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 TRAV5A0A0B4J249 113 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 SPINT2O43291 252 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 IL6RP08887 468 aaPredicted RBP14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 GPR6P46095 362 aaPredicted RBP14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 ARSJQ5FYB0 599 aaPredicted RBP14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 LYG1Q8N1E2 194 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 NANOS1Q8WY41 292 aaKnown RBP14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 GP6Q9HCN6 339 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 FBXL7Q9UJT9 491 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 WIPI2Q9Y4P8 454 aa14.11□□□□□ -0.15
PPP4R3A-208ENST00000555462 DSCAMO60469 2012 aa14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 TOX4O94842 621 aa14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 C1orf194Q5T5A4 169 aa14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 MMD2Q8IY49 270 aa14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 GNB4Q9HAV0 340 aa14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 EFNB3Q15768 340 aa14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 LINC00596Q86U02 117 aa14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 ZCCHC24Q8N2G6 241 aaKnown RBP14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 OR5AU1Q8NGC0 362 aa14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 ABI3Q9P2A4 366 aa14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 TIMM9Q9Y5J7 89 aa14.1□□□□□ -0.15
PPP4R3A-208ENST00000555462 H0Y8G0 127 aa14.09□□□□□ -0.15
PPP4R3A-208ENST00000555462 TCF21O43680 179 aa14.09□□□□□ -0.15
PPP4R3A-208ENST00000555462 GCHFRP30047 84 aa14.09□□□□□ -0.15
PPP4R3A-208ENST00000555462 HOXC12P31275 282 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms