RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 AHRRA9YTQ3 701 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 FCGR3BO75015 233 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 SERF1AO75920 110 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 SP1P08047 785 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 ESDP10768 282 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 IGHV1-2P23083 117 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 DUTP33316 252 aaKnown RBP4.48□□□□□ -1.69
LIMA1-212ENST00000552491 MEOX1P50221 254 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 TPPP2P59282 170 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 RPL31P62899 125 aaKnown RBP4.48□□□□□ -1.69
LIMA1-212ENST00000552491 TGFBR3Q03167 851 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 DCAF10Q5QP82 559 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 TOMM20LQ6UXN7 152 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 WDR82Q6UXN9 313 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 ZNF705AQ6ZN79 300 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-212ENST00000552491 ACP7Q6ZNF0 438 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 TEX43Q6ZNM6 134 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 OR10G8Q8NGN5 311 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 OBP2BQ9NPH6 170 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 IL17BQ9UHF5 180 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 SVILO95425 2214 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 TECTAO75443 2155 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 LAMA5O15230 3695 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 FAM90A9PA6NNJ1 464 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 ZNF891A8MT65 544 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-212ENST00000552491 TNFSF13O75888 250 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 CXorf1O96002 111 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 NPSP0C0P6 89 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 ZNF134P52741 427 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 TMPRSS3P57727 454 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 OR5I1Q13606 314 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 LPAL2Q16609 132 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 PDLIM3Q53GG5 364 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-212ENST00000552491 RPL39P5Q59GN2 51 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 ARSJQ5FYB0 599 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-212ENST00000552491 GCNT2Q8N0V5 402 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 CD177Q8N6Q3 437 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 Q8N976 141 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 C20orf144Q9BQM9 153 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 HSPB9Q9BQS6 159 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 MRPL18Q9H0U6 180 aaKnown RBP4.48□□□□□ -1.69
LIMA1-212ENST00000552491 MSL2Q9HCI7 577 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 IL36BQ9NZH7 164 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 PAM16Q9Y3D7 125 aa4.48□□□□□ -1.69
LIMA1-212ENST00000552491 LSM4Q9Y4Z0 139 aaKnown RBP4.48□□□□□ -1.69
LIMA1-212ENST00000552491 DSCAMO60469 2012 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 BOD1L1Q8NFC6 3051 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 INTS1Q8N201 2190 aaKnown RBP4.47□□□□□ -1.69
LIMA1-212ENST00000552491 AGFG2O95081 481 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 MYOD1P15172 320 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 CRISP2P16562 243 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 GCHFRP30047 84 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 LGALS4P56470 323 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 RANP62826 216 aaKnown RBP4.47□□□□□ -1.69
LIMA1-212ENST00000552491 ZNF90Q03938 601 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 EDDM3AQ14507 147 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 PRAMEF5Q5TYX0 476 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 PEAR1Q5VY43 1037 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-212ENST00000552491 ST6GALNAC3Q8NDV1 305 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 OR52E5Q8NH55 327 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 VN1R17PQ8TDU5 208 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 MIEN1Q9BRT3 115 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 ZPBPQ9BS86 351 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 TMEM208Q9BTX3 173 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 PARD6AQ9NPB6 346 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 HEYLQ9NQ87 328 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-212ENST00000552491 ABI3Q9P2A4 366 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 FBXL7Q9UJT9 491 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 DSCAML1Q8TD84 2053 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 SPINK4O60575 86 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 TNFSF15O95150 251 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 CER1O95813 267 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 ADH4P08319 380 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 IL6RP08887 468 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-212ENST00000552491 IER3P46695 156 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 HTD2P86397 168 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 Q0VG73 95 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 EFNB3Q15768 340 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 ATP1A1-AS1Q5TC04 95 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 ASPHD1Q5U4P2 390 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 FAM90A1Q86YD7 464 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 MDS2Q8NDY4 140 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 OR4A16Q8NH70 328 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 FAM122AQ96E09 287 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 NPVFQ9HCQ7 196 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 LY96Q9Y6Y9 160 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 V9GYV3 84 aa4.47□□□□□ -1.69
LIMA1-212ENST00000552491 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.46□□□□□ -1.7
LIMA1-212ENST00000552491 A8MXE2 369 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 C9JCJ5 164 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 M0R1X1 148 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 SPINT2O43291 252 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 CGAP01215 116 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 RPLP1P05386 114 aaKnown RBP4.46□□□□□ -1.7
LIMA1-212ENST00000552491 ACP1P24666 158 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 BRS3P32247 399 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 GPR12P47775 334 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 TNFSF10P50591 281 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 SLC35B1P78383 322 aa4.46□□□□□ -1.7
LIMA1-212ENST00000552491 GAGE1Q13065 139 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms