RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 ZFAND1Q8TCF1 268 aa12.18□□□□□ -0.46
CHMP1A-206ENST00000549139 P2RX4Q99571 388 aa12.18□□□□□ -0.46
CHMP1A-206ENST00000549139 PHB2Q99623 299 aa12.18□□□□□ -0.46
CHMP1A-206ENST00000549139 MCRIP2Q9BUT9 160 aaKnown RBP12.18□□□□□ -0.46
CHMP1A-206ENST00000549139 SLC2A9Q9NRM0 540 aa12.18□□□□□ -0.46
CHMP1A-206ENST00000549139 V9GYH0 126 aa12.18□□□□□ -0.46
CHMP1A-206ENST00000549139 CCL24O00175 119 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 MPPED1O15442 326 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 S1PR2O95136 353 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 FGF2P09038 288 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 RUNX1Q01196 453 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 SCGB2B2Q4G0G5 96 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 PYDC2Q56P42 97 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 DMBX1Q8NFW5 382 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 OR4C16Q8NGL9 310 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 OR6Q1Q8NGQ2 317 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 RAX2Q96IS3 184 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 SPIN2AQ99865 258 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 SPIN2BQ9BPZ2 258 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 HRASLSQ9HDD0 168 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 STARD9Q9P2P6 4700 aa12.17□□□□□ -0.46
CHMP1A-206ENST00000549139 I3L521 148 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 UPK2O00526 184 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 RPL27AP46776 148 aaKnown RBP12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 RPL8P62917 257 aaKnown RBP12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 ZNF79Q15937 498 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 FAAP20Q6NZ36 180 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 MUC7Q8TAX7 377 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 CASTOR1Q8WTX7 329 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 MS4A10Q96PG2 267 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 PRRT1Q99946 306 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 GNB4Q9HAV0 340 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 ZNF355PQ9NSJ1 428 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 TMEM140Q9NV12 185 aa12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 GAR1Q9NY12 217 aaKnown RBP12.16□□□□□ -0.46
CHMP1A-206ENST00000549139 MARCH11A6NNE9 402 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 TRGV3P03979 118 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 CTSDP07339 412 aaPredicted RBP12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 OR9G9P0C7N8 305 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 PPP5CP53041 499 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 PIGPP57054 158 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 TPPP2P59282 170 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 ERVK-16P61578 105 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 SURF2Q15527 256 aaPredicted RBP12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 SPANXN2Q5MJ10 180 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 C10orf55Q5SWW7 151 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 Q8N402 240 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 TTC9CQ8N5M4 171 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 MARCH1Q8TCQ1 289 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 MRGPRFQ96AM1 343 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 SLC2A8Q9NY64 477 aa12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 ZMAT5Q9UDW3 170 aaKnown RBP12.15□□□□□ -0.46
CHMP1A-206ENST00000549139 TRAV3A0A0B4J244 114 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 LCE6AA0A183 80 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 E7EUB6 86 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 KRASP01116 189 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 APELAP0DMC3 54 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 HLA-GP17693 338 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 PI3P19957 117 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 DEFB136Q30KP8 78 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 SLC25A42Q86VD7 318 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 CCDC71LQ8N9Z2 235 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 ADAD2Q8NCV1 583 aaKnown RBP12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 OR11H1Q8NG94 326 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 OR51S1Q8NGJ8 323 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 OR13C8Q8NGS7 320 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 DEDD2Q8WXF8 326 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 TRIM63Q969Q1 353 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 DUX3Q96PT4 197 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 ASCL2Q99929 193 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 COPZ2Q9P299 210 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 SCP2D1Q9UJQ7 156 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 GPR132Q9UNW8 380 aa12.14□□□□□ -0.47
CHMP1A-206ENST00000549139 A0A0G2JLM5 398 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 TEX22C9J3V5 150 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 LGALS1P09382 135 aaKnown RBP12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 RPA2P15927 270 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 G6PCP35575 357 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 AP3S2P59780 193 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 FHL3Q13643 280 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 TOMM5Q8N4H5 51 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 OR1N2Q8NGR9 330 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 FYTTD1Q96QD9 318 aaKnown RBP12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 RTBDNQ9BSG5 229 aaPredicted RBP12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 COMMD5Q9GZQ3 224 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 SRRQ9GZT4 340 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 COA4Q9NYJ1 87 aa12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 C14orf166Q9Y224 244 aaKnown RBP12.13□□□□□ -0.47
CHMP1A-206ENST00000549139 C3orf85A0A1B0GTC6 90 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 A0A1B0GW64 132 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 HMX3A6NHT5 357 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 H0Y980 276 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 B3GALNT1O75752 331 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 IGKV1-39P01597 117 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 IGKV1D-39P04432 117 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 SERPINE2P07093 398 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 FAUP35544 74 aaKnown RBP12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 OR2B8PP59922 312 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 ZNF616Q08AN1 781 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 KLF9Q13886 244 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms