RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SLC25A15Q9Y619 301 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 MGST1P10620 155 aaKnown RBP11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 OR5I1Q13606 314 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 SGMS2Q8NHU3 365 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 MALSU1Q96EH3 234 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 CA2P00918 260 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 IGHG3P01860 377 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 KITLGP21583 273 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 NPY1RP25929 384 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 CHRNB4P30926 498 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 DEFA6Q01524 100 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 C10orf55Q5SWW7 151 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 OR2T10Q8NGZ9 312 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 OR51M1Q9H341 326 aa11.29□□□□□ -0.6
PRPF40B-209ENST00000548825 A0A1B0GW64 132 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 AHRRA9YTQ3 701 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 SRRM5B3KS81 715 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 C15orf65H3BRN8 121 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 MBP02144 154 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 NPPCP23582 126 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 ZBTB34Q8NCN2 500 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 MDFIC2A0A1B0GVS7 189 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 SEC14L6B5MCN3 397 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 F6UZH7 168 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 PPIHO43447 177 aaKnown RBP11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 NDUFS6O75380 124 aaKnown RBP11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 SSTP61278 116 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 GNB1P62873 340 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 PSG5Q15238 335 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 LURAP1Q96LR2 239 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 HES4Q9HCC6 221 aa11.28□□□□□ -0.6
PRPF40B-209ENST00000548825 J3QR06 171 aa11.27□□□□□ -0.6
PRPF40B-209ENST00000548825 PAX6P26367 422 aa11.27□□□□□ -0.6
PRPF40B-209ENST00000548825 FXYD3Q14802 87 aa11.27□□□□□ -0.6
PRPF40B-209ENST00000548825 SLC35D1Q9NTN3 355 aa11.27□□□□□ -0.6
PRPF40B-209ENST00000548825 RNF7Q9UBF6 113 aa11.27□□□□□ -0.6
PRPF40B-209ENST00000548825 A0A087WWC5 75 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 LYNX1G3V0Z9 82 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 H3BTX0 84 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 SCGB1D1O95968 90 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 CGAP01215 116 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 LYNX1P0DP58 116 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 HIST3H2BBQ8N257 126 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 SLC24A4Q8NFF2 622 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 OR4S2Q8NH73 311 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 IGFBPL1Q8WX77 278 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 MGST2Q99735 147 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 IFI27L2Q9H2X8 130 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 FAM215AQ9Y5M1 114 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 FOSL1P15407 271 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 ATP6V1FQ16864 119 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 DYNLRB1Q9NP97 96 aa11.27□□□□□ -0.61
PRPF40B-209ENST00000548825 TRAV1-1A0A0B4J248 108 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 TNFSF4P23510 183 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 SPCS3P61009 180 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 RPL31P62899 125 aaKnown RBP11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 ZNF90Q03938 601 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 STPG3Q8N7X2 389 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 OR10X1Q8NGY0 326 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 OR51B2Q9Y5P1 312 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 TRAPPC1Q9Y5R8 145 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 ZNF891A8MT65 544 aaPredicted RBP11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 B4DEV8 164 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 RPP30P78346 268 aaKnown RBP11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 KIAA1644Q3SXP7 199 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 STUMQ69YW2 141 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 PRR27Q6MZM9 219 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 MIR17HGQ75NE6 70 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 NEUROG1Q92886 237 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 CACNA1AO00555 2505 aa11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 TET2Q6N021 2002 aaPredicted RBP11.26□□□□□ -0.61
PRPF40B-209ENST00000548825 A0A1W2PRD5 423 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 A0A1W2PRF3 423 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 A0A1W2PRM7 423 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 IGHV1-46P01743 117 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 GNB2P62879 340 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 MZT1Q08AG7 82 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 PRR30Q53SZ7 412 aaPredicted RBP11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 UNQ6494/PRO21346Q6UXR6 183 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 SEBOXQ9HB31 216 aaPredicted RBP11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 PMS2P5A8MQ11 134 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 ZNF705FA8MVS1 300 aaPredicted RBP11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 GFRA3O60609 400 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 ZNF705DP0CH99 300 aaPredicted RBP11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 ZNF705BP0CI00 300 aaPredicted RBP11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 ERVFC1-1P60608 527 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 C19orf35Q6ZS72 473 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 DOLPP1Q86YN1 238 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 UHRF2Q96PU4 802 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 HIST1H2BLQ99880 126 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 KMT2EQ8IZD2 1858 aa11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 IL6RP08887 468 aaPredicted RBP11.25□□□□□ -0.61
PRPF40B-209ENST00000548825 OR4A8P0C604 315 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms