RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 RBMXL2O75526 392 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 RNASE1P07998 156 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 OR9G9P0C7N8 305 aa12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 NKX2-1P43699 371 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 COMPP49747 757 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 ATP5IP56385 69 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 OR11H7Q8NGC8 314 aa12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 RITA1Q96K30 269 aa12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 OR10C1Q96KK4 312 aa12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 CIB3Q96Q77 187 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 FBXL15Q9H469 300 aa12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 SOX21Q9Y651 276 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 NIPBLQ6KC79 2804 aaeCLIP12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 C13orf42A0A1B0GVH6 325 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 A0A1W2PN81 502 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 FAM25EA8MYX2 175 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 ST8SIA3O43173 380 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 SCAF4O95104 1147 aaKnown RBP12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 CHRNA7P36544 502 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 H2BFSP57053 126 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 PRCDQ00LT1 54 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 ID3Q02535 119 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 TNFRSF9Q07011 255 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 IL15RAQ13261 267 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 QTRT1Q9BXR0 403 aaKnown RBP12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 OR51B2Q9Y5P1 312 aa12.73□□□□□ -0.37
PRPF40A-212ENST00000545856 DNAJC9-AS1A6NH13 148 aa12.72□□□□□ -0.37
PRPF40A-212ENST00000545856 CXCL3P19876 107 aa12.72□□□□□ -0.37
PRPF40A-212ENST00000545856 CNTFRP26992 372 aa12.72□□□□□ -0.37
PRPF40A-212ENST00000545856 CRIP2P52943 208 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-212ENST00000545856 LY6EQ16553 131 aa12.72□□□□□ -0.37
PRPF40A-212ENST00000545856 C2orf68Q2NKX9 166 aa12.72□□□□□ -0.37
PRPF40A-212ENST00000545856 Q6ZRM9 215 aa12.72□□□□□ -0.37
PRPF40A-212ENST00000545856 RAB40CQ96S21 281 aa12.72□□□□□ -0.37
PRPF40A-212ENST00000545856 CLCC1Q96S66 551 aa12.72□□□□□ -0.37
PRPF40A-212ENST00000545856 NF1P21359 2839 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 WRBO00258 174 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 CCSO14618 274 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 TCF21O43680 179 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 GPR137BO60478 399 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 TSPAN9O75954 239 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 CA2P00918 260 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 IGHG2P01859 326 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 RLN2P04090 185 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 PVALBP20472 110 aaPredicted RBP12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 RPL27AP46776 148 aaKnown RBP12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 TAS2R30P59541 319 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 MRGPRG-AS1Q2M3A8 158 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 AKAP14Q86UN6 197 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 TMEM219Q86XT9 240 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 ARPC1AQ92747 370 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 CHIAQ9BZP6 476 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 PRSS22Q9GZN4 317 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 NDUFA4L2Q9NRX3 87 aa12.71□□□□□ -0.37
PRPF40A-212ENST00000545856 MPTX1A8MV57 137 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 TRIM77I1YAP6 450 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 CHST1O43916 411 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 CNIH1O95406 144 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 IFNA17P01571 189 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 PSMB6P28072 239 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 OR2B8PP59922 312 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 TNXAQ16473 311 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 NOXA1Q86UR1 476 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 TCTE3Q8IZS6 198 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 OR1L6Q8NGR2 347 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 SRSF12Q8WXF0 261 aaKnown RBP12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 GON7Q9BXV9 100 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 PLEKHA3Q9HB20 300 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 ENY2Q9NPA8 101 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 TPSG1Q9NRR2 321 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 GSKIPQ9P0R6 139 aa12.7□□□□□ -0.38
PRPF40A-212ENST00000545856 hCG_2014768A0A024R1R8 64 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 IGHV7-81A0A0B4J1V7 117 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 TRAV3A0A0B4J244 114 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 TEX50A0A1B0GTY4 177 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 A0A1B0GVG6 124 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 SYNGR2O43760 224 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 CCNKO75909 580 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 AMY1AP04745 511 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 IGF1P05019 195 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 CX3CL1P78423 397 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 TMEM267Q0VDI3 215 aaPredicted RBP12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 FBLN7Q53RD9 439 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 Q8N2B8 174 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 PPP1R1CQ8WVI7 109 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 WSB1Q9Y6I7 421 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 AP4M1O00189 453 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 CYB5BO43169 146 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 UBA52P62987 128 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 RPP30P78346 268 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 FXYD3Q14802 87 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 Q71RC1 249 aaPredicted RBP12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 ZNF114Q8NC26 417 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 SGMS2Q8NHU3 365 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 DTD1Q8TEA8 209 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 HIPK2Q9H2X6 1198 aa12.69□□□□□ -0.38
PRPF40A-212ENST00000545856 ZFHX3Q15911 3703 aa12.68□□□□□ -0.38
PRPF40A-212ENST00000545856 E5RGE8 158 aa12.68□□□□□ -0.38
PRPF40A-212ENST00000545856 TSC22D2O75157 780 aa12.68□□□□□ -0.38
PRPF40A-212ENST00000545856 BRI3O95415 125 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms