RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SSBP2P81877 361 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-205ENST00000536255 MRGPRG-AS1Q2M3A8 158 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 H2BFWTQ7Z2G1 175 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 RNF152Q8N8N0 203 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 TP53RKQ96S44 253 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 COMMD5Q9GZQ3 224 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 TMEM222Q9H0R3 208 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 FKBP11Q9NYL4 201 aa10.59□□□□□ -0.71
RPAIN-205ENST00000536255 MSGN1A6NI15 193 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 IGLV1-40P01703 118 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 IL6RP08887 468 aaPredicted RBP10.58□□□□□ -0.72
RPAIN-205ENST00000536255 OR5AC1P0C628 307 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 PF4V1P10720 104 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 ANXA3P12429 323 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 AKR1C4P17516 323 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 PSMB8P28062 276 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 SLC6A1P30531 599 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 AKR1C2P52895 323 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 SP6Q3SY56 376 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 TMEM128Q5BJH2 165 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 C19orf54Q5BKX5 351 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 TMED4Q7Z7H5 227 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 SLC25A42Q86VD7 318 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 RNASE11Q8TAA1 199 aaKnown RBP10.58□□□□□ -0.72
RPAIN-205ENST00000536255 GALNT14Q96FL9 552 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 SEC22AQ96IW7 307 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 PRNDQ9UKY0 176 aa10.58□□□□□ -0.72
RPAIN-205ENST00000536255 H3BUA1 57 aa10.57□□□□□ -0.72
RPAIN-205ENST00000536255 LYRM1O43325 122 aa10.57□□□□□ -0.72
RPAIN-205ENST00000536255 IGKV1-39P01597 117 aa10.57□□□□□ -0.72
RPAIN-205ENST00000536255 IGKV1D-39P04432 117 aa10.57□□□□□ -0.72
RPAIN-205ENST00000536255 CCR6P51684 374 aa10.57□□□□□ -0.72
RPAIN-205ENST00000536255 RPL23AP62750 156 aaKnown RBP10.57□□□□□ -0.72
RPAIN-205ENST00000536255 SRPXP78539 464 aa10.57□□□□□ -0.72
RPAIN-205ENST00000536255 THOC7Q6I9Y2 204 aaKnown RBP10.57□□□□□ -0.72
RPAIN-205ENST00000536255 ZNF695Q8IW36 515 aa10.57□□□□□ -0.72
RPAIN-205ENST00000536255 CENPSQ8N2Z9 138 aa10.57□□□□□ -0.72
RPAIN-205ENST00000536255 ADAD2Q8NCV1 583 aaKnown RBP10.57□□□□□ -0.72
RPAIN-205ENST00000536255 OR4A16Q8NH70 328 aa10.57□□□□□ -0.72
RPAIN-205ENST00000536255 RRNAD1Q96FB5 475 aaKnown RBP10.57□□□□□ -0.72
RPAIN-205ENST00000536255 SLA2Q9H6Q3 261 aa10.57□□□□□ -0.72
RPAIN-205ENST00000536255 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 TNCP24821 2201 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 NUDT19A8MXV4 375 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 RBMXL2O75526 392 aaKnown RBP10.56□□□□□ -0.72
RPAIN-205ENST00000536255 NDUFB6O95139 128 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 CDS2O95674 445 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 RPLP1P05386 114 aaKnown RBP10.56□□□□□ -0.72
RPAIN-205ENST00000536255 RAB9AP51151 201 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 UBE2MP61081 183 aaKnown RBP10.56□□□□□ -0.72
RPAIN-205ENST00000536255 C10orf55Q5SWW7 151 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 MZT2BQ6NZ67 158 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 FAM219AQ8IW50 185 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 OR1L8Q8NGR8 309 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 GLYATL2Q8WU03 294 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 RBPMSQ93062 196 aaKnown RBP10.56□□□□□ -0.72
RPAIN-205ENST00000536255 IL22RA2Q969J5 263 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 TMEM230Q96A57 120 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 FYTTD1Q96QD9 318 aaKnown RBP10.56□□□□□ -0.72
RPAIN-205ENST00000536255 SRSF8Q9BRL6 282 aaKnown RBP10.56□□□□□ -0.72
RPAIN-205ENST00000536255 QTRT1Q9BXR0 403 aaKnown RBP10.56□□□□□ -0.72
RPAIN-205ENST00000536255 ZNF355PQ9NSJ1 428 aa10.56□□□□□ -0.72
RPAIN-205ENST00000536255 TRAV3A0A0B4J244 114 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 C15orf61A6NNL5 157 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 PLA2G10O15496 165 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 UPK1BO75841 260 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 DHFRP00374 187 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 PF4P02776 101 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 OR9G9P0C7N8 305 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 CDX1P47902 265 aaPredicted RBP10.55□□□□□ -0.72
RPAIN-205ENST00000536255 DEFA6Q01524 100 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 HSD17B13Q7Z5P4 300 aaPredicted RBP10.55□□□□□ -0.72
RPAIN-205ENST00000536255 C1QL4Q86Z23 238 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 MRPL41Q8IXM3 137 aaKnown RBP10.55□□□□□ -0.72
RPAIN-205ENST00000536255 TTC9CQ8N5M4 171 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 OR5T1Q8NG75 326 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 OR5B3Q8NH48 314 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 UBE2E2Q96LR5 201 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 TMEM56Q96MV1 263 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 COA4Q9NYJ1 87 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 ZNF257Q9Y2Q1 563 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 OR51B2Q9Y5P1 312 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 TMEM56-RWDD3S4R434 201 aa10.55□□□□□ -0.72
RPAIN-205ENST00000536255 TEX22C9J3V5 150 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 G3V4G9 280 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 SOX15O60248 233 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 BRI3O95415 125 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 TRGV3P03979 118 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 TRAPPC2P0DI81 140 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 TRAPPC2BP0DI82 140 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 APELAP0DMC3 54 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 VAMP1P23763 118 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 BTCP35070 178 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 RAB25P57735 213 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 TPPP2P59282 170 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 OR2B8PP59922 312 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 TMEM187Q14656 261 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 ASPHD1Q5U4P2 390 aa10.54□□□□□ -0.72
RPAIN-205ENST00000536255 TMEM268Q5VZI3 342 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms