RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 G6PCP35575 357 aa17.64■□□□□ 0.41
SFSWAP-204ENST00000535399 RUNX1Q01196 453 aa17.64■□□□□ 0.41
SFSWAP-204ENST00000535399 SURF2Q15527 256 aaPredicted RBP17.64■□□□□ 0.41
SFSWAP-204ENST00000535399 MRPL41Q8IXM3 137 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-204ENST00000535399 RTBDNQ9BSG5 229 aaPredicted RBP17.64■□□□□ 0.41
SFSWAP-204ENST00000535399 SLA2Q9H6Q3 261 aa17.64■□□□□ 0.41
SFSWAP-204ENST00000535399 HMX3A6NHT5 357 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 H0Y980 276 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 FGF2P09038 288 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 OR9G9P0C7N8 305 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 TPPP2P59282 170 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 AP3S2P59780 193 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 TOMM5Q8N4H5 51 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 CCDC71LQ8N9Z2 235 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 OR5B12Q96R08 314 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 TP53RKQ96S44 253 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 C5orf66Q9H5L9 145 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 ZNF355PQ9NSJ1 428 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 MCUBQ9NWR8 336 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 COPZ2Q9P299 210 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 GPR132Q9UNW8 380 aa17.63■□□□□ 0.41
SFSWAP-204ENST00000535399 CGB1A6NKQ9 187 aa17.62■□□□□ 0.41
SFSWAP-204ENST00000535399 TRGV3P03979 118 aa17.62■□□□□ 0.41
SFSWAP-204ENST00000535399 TTC9CQ8N5M4 171 aa17.62■□□□□ 0.41
SFSWAP-204ENST00000535399 GDPD1Q8N9F7 314 aa17.62■□□□□ 0.41
SFSWAP-204ENST00000535399 FYTTD1Q96QD9 318 aaKnown RBP17.62■□□□□ 0.41
SFSWAP-204ENST00000535399 SDHCQ99643 169 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-204ENST00000535399 SCP2D1Q9UJQ7 156 aa17.62■□□□□ 0.41
SFSWAP-204ENST00000535399 C14orf166Q9Y224 244 aaKnown RBP17.62■□□□□ 0.41
SFSWAP-204ENST00000535399 C3orf85A0A1B0GTC6 90 aa17.61■□□□□ 0.41
SFSWAP-204ENST00000535399 SERPINE2P07093 398 aa17.61■□□□□ 0.41
SFSWAP-204ENST00000535399 CD33P20138 364 aa17.61■□□□□ 0.41
SFSWAP-204ENST00000535399 FAUP35544 74 aaKnown RBP17.61■□□□□ 0.41
SFSWAP-204ENST00000535399 OR2B8PP59922 312 aa17.61■□□□□ 0.41
SFSWAP-204ENST00000535399 SEC22AQ96IW7 307 aa17.61■□□□□ 0.41
SFSWAP-204ENST00000535399 COA4Q9NYJ1 87 aa17.61■□□□□ 0.41
SFSWAP-204ENST00000535399 G3V4G9 280 aa17.6■□□□□ 0.41
SFSWAP-204ENST00000535399 FHL3Q13643 280 aa17.6■□□□□ 0.41
SFSWAP-204ENST00000535399 BAK1Q16611 211 aa17.6■□□□□ 0.41
SFSWAP-204ENST00000535399 SAMD5Q5TGI4 173 aa17.6■□□□□ 0.41
SFSWAP-204ENST00000535399 DEDD2Q8WXF8 326 aa17.6■□□□□ 0.41
SFSWAP-204ENST00000535399 ALX4Q9H161 411 aaPredicted RBP17.6■□□□□ 0.41
SFSWAP-204ENST00000535399 NPIPB5A8MRT5 1133 aa17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 RBMXL2O75526 392 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 IGHV3-11P01762 117 aa17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 LGALS1P09382 135 aaKnown RBP17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 AREGP15514 252 aa17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 SP6Q3SY56 376 aa17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 SLC25A42Q86VD7 318 aa17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 C1QL4Q86Z23 238 aa17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 OR11H1Q8NG94 326 aa17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 OR1N2Q8NGR9 330 aa17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 NSG2Q9Y328 171 aa17.59■□□□□ 0.41
SFSWAP-204ENST00000535399 PRH1P02810 166 aa17.58■□□□□ 0.4
SFSWAP-204ENST00000535399 UCP1P25874 307 aa17.58■□□□□ 0.4
SFSWAP-204ENST00000535399 DEFA5Q01523 94 aa17.58■□□□□ 0.4
SFSWAP-204ENST00000535399 ZNF45Q02386 682 aa17.58■□□□□ 0.4
SFSWAP-204ENST00000535399 CNPY1Q3B7I2 92 aa17.58■□□□□ 0.4
SFSWAP-204ENST00000535399 OXLD1Q5BKU9 147 aa17.58■□□□□ 0.4
SFSWAP-204ENST00000535399 COMMD5Q9GZQ3 224 aa17.58■□□□□ 0.4
SFSWAP-204ENST00000535399 NAA60Q9H7X0 242 aa17.58■□□□□ 0.4
SFSWAP-204ENST00000535399 ZNF257Q9Y2Q1 563 aa17.58■□□□□ 0.4
SFSWAP-204ENST00000535399 MEGF8Q7Z7M0 2845 aa17.58■□□□□ 0.4
SFSWAP-204ENST00000535399 TRBV9A0A0B4J1U6 114 aa17.57■□□□□ 0.4
SFSWAP-204ENST00000535399 CRYM-AS1A6NIL9 109 aa17.57■□□□□ 0.4
SFSWAP-204ENST00000535399 B3GALNT1O75752 331 aa17.57■□□□□ 0.4
SFSWAP-204ENST00000535399 SNAPC5O75971 98 aa17.57■□□□□ 0.4
SFSWAP-204ENST00000535399 CRYGCP07315 174 aa17.57■□□□□ 0.4
SFSWAP-204ENST00000535399 IGLL1P15814 213 aa17.57■□□□□ 0.4
SFSWAP-204ENST00000535399 C19orf35Q6ZS72 473 aa17.57■□□□□ 0.4
SFSWAP-204ENST00000535399 SCGB3A2Q96PL1 93 aa17.57■□□□□ 0.4
SFSWAP-204ENST00000535399 SRSF8Q9BRL6 282 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-204ENST00000535399 QTRT1Q9BXR0 403 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-204ENST00000535399 A0A0G2JLM5 398 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 TEX13DA0A0J9YY54 714 aaPredicted RBP17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 TEX50A0A1B0GTY4 177 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 C13orf42A0A1B0GVH6 325 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 IGLC7A0M8Q6 106 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 DBX1A6NMT0 343 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 IGKV1-5P01602 117 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 OR5AC1P0C628 307 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 P0C879 139 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 CTRB1P17538 263 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 PSMB6P28072 239 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 ZNF616Q08AN1 781 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 ZNF57Q68EA5 555 aaPredicted RBP17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 CTRB2Q6GPI1 263 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 H2BFWTQ7Z2G1 175 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 OR1L8Q8NGR8 309 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 TMEM230Q96A57 120 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 RCC1LQ96I51 464 aaKnown RBP17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 USMG5Q96IX5 58 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 TSC22D3Q99576 134 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 TMEM14BQ9NUH8 114 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 PRNDQ9UKY0 176 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 OR51B2Q9Y5P1 312 aa17.56■□□□□ 0.4
SFSWAP-204ENST00000535399 RAB25P57735 213 aa17.55■□□□□ 0.4
SFSWAP-204ENST00000535399 RHOGP84095 191 aa17.55■□□□□ 0.4
SFSWAP-204ENST00000535399 TRIM16LQ309B1 348 aa17.55■□□□□ 0.4
SFSWAP-204ENST00000535399 TRIQKQ629K1 86 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms