RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CTXN2P0C2S0 81 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 ARL14EPLP0DKL9 152 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 HOXA6P31267 233 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 OMPP47874 163 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 IDH3GP51553 393 aaPredicted RBP1.61□□□□□ -2.15
PRKDC-205ENST00000535375 RAP1GDS1P52306 607 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 ERVS71-1P61550 626 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 AESQ08117 197 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 ZNF791Q3KP31 576 aaPredicted RBP1.61□□□□□ -2.15
PRKDC-205ENST00000535375 GLT8D1Q68CQ7 371 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 Q6ZTI0 123 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 MRPS24Q96EL2 167 aaKnown RBP1.61□□□□□ -2.15
PRKDC-205ENST00000535375 ERMAPQ96PL5 475 aaPredicted RBP1.61□□□□□ -2.15
PRKDC-205ENST00000535375 OR51V1Q9H2C8 321 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 MRPL27Q9P0M9 148 aaKnown RBP1.61□□□□□ -2.15
PRKDC-205ENST00000535375 ICE1Q9Y2F5 2266 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 SIPA1L1O43166 1804 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 TENM1Q9UKZ4 2725 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 ARHGAP32A7KAX9 2087 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 WRNQ14191 1432 aaPredicted RBP eCLIP1.6□□□□□ -2.15
PRKDC-205ENST00000535375 IGLV3-9A0A075B6K5 115 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 TRAV41A0A0B4J266 112 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 TMEM269A0A1B0GVZ9 245 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 H3BRN7 92 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 I3L521 148 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 LEPROTO15243 131 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 TFPTP0C1Z6 253 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 KCNE1P15382 129 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 CCR2P41597 374 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 RAB13P51153 203 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 OR4D2P58180 307 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 PSME3P61289 254 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 AP1S1P61966 158 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 LYZL1Q6UWQ5 148 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 SLC35E3Q7Z769 313 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 C20orf196Q8IYI0 205 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 SPACA4Q8TDM5 124 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 KLK6Q92876 244 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 PPP1R14BQ96C90 147 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 PPP1R2P1Q96PQ5 205 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 IMMP2LQ96T52 175 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.6□□□□□ -2.15
PRKDC-205ENST00000535375 CISHQ9NSE2 258 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 CMTM6Q9NX76 183 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 ZNF532Q9HCE3 1301 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 KDM5BQ9UGL1 1544 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 WDR90Q96KV7 1748 aa1.6□□□□□ -2.15
PRKDC-205ENST00000535375 SCN9AQ15858 1988 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 RTEL1-TNFRSF6BF6WH68 1400 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 TRAV7A0A075B6U4 112 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 TMSB15BA0A087X1C1 80 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 A0A0J9YY10 115 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 A0A1B0GX78 115 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 PQLC2LA1A4F0 135 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 ZNF705FA8MVS1 300 aaPredicted RBP1.59□□□□□ -2.15
PRKDC-205ENST00000535375 C1QAP02745 245 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 LGALS1P09382 135 aaKnown RBP1.59□□□□□ -2.15
PRKDC-205ENST00000535375 CD79AP11912 226 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 PSMB8P28062 276 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 TPI1P60174 286 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 SPOPLQ6IQ16 392 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 TBC1D19Q8N5T2 526 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 OR4X2Q8NGF9 303 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 OR51T1Q8NGJ9 327 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 RNASE11Q8TAA1 199 aaKnown RBP1.59□□□□□ -2.15
PRKDC-205ENST00000535375 OR8D2Q9GZM6 311 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 VCX3BQ9H321 246 aa1.59□□□□□ -2.15
PRKDC-205ENST00000535375 PAQR5Q9NXK6 330 aaPredicted RBP1.59□□□□□ -2.15
PRKDC-205ENST00000535375 MTUS2Q5JR59 1369 aa1.59□□□□□ -2.16
PRKDC-205ENST00000535375 PLXNA3P51805 1871 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 TRBV20OR9-2A0A075B6H5 130 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 A0A087WUJ7 227 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 ARRDC5A6NEK1 342 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 SMIM9A6NGZ8 99 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 TMEM210A6NLX4 147 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 TMEM114B3SHH9 223 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 TTRP02766 147 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 PEBP1P30086 187 aaKnown RBP1.58□□□□□ -2.16
PRKDC-205ENST00000535375 S100A7P31151 101 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 RPL28P46779 137 aaKnown RBP1.58□□□□□ -2.16
PRKDC-205ENST00000535375 CSN1S1P47710 185 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 EVX1P49640 407 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 RAB14P61106 215 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 SNRPD2P62316 118 aaKnown RBP1.58□□□□□ -2.16
PRKDC-205ENST00000535375 CCL20P78556 96 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 SRSF6Q13247 344 aaKnown RBP1.58□□□□□ -2.16
PRKDC-205ENST00000535375 Q6ZS49 121 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 TIMM21Q9BVV7 248 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 FAM96AQ9H5X1 160 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 EFCAB1Q9HAE3 211 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 FUT9Q9Y231 359 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 FLT4P35916 1363 aa1.58□□□□□ -2.16
PRKDC-205ENST00000535375 STRCP1A6NGW2 1772 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 IGHV1-18A0A0C4DH31 117 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 H3BT86 120 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 PSMD12O00232 456 aaPredicted RBP1.57□□□□□ -2.16
PRKDC-205ENST00000535375 KLRC4O43908 158 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 FADS1O60427 444 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 HAND1O96004 215 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 HLA-DRB1P01911 266 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms