RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 RPP25LQ8N5L8 163 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-223ENST00000520520 ABHD5Q8WTS1 349 aa7.18□□□□□ -1.26
CTNNA1-223ENST00000520520 TRIB1Q96RU8 372 aa7.18□□□□□ -1.26
CTNNA1-223ENST00000520520 PRDM13Q9H4Q3 707 aa7.18□□□□□ -1.26
CTNNA1-223ENST00000520520 OBP2BQ9NPH6 170 aa7.18□□□□□ -1.26
CTNNA1-223ENST00000520520 JPT1Q9UK76 154 aa7.18□□□□□ -1.26
CTNNA1-223ENST00000520520 WDR83OSQ9Y284 106 aa7.18□□□□□ -1.26
CTNNA1-223ENST00000520520 ARHGAP21Q5T5U3 1957 aa7.18□□□□□ -1.26
CTNNA1-223ENST00000520520 A0A087X0M5 115 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 TRBV23-1A0A0A0MS06 115 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 A0A1B0GX30 115 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 A0A1W2PPQ1 181 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 CDIPTO14735 213 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 RBFOX2O43251 390 aaKnown RBP eCLIP7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 CXorf1O96002 111 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 KRASP01116 189 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 GRPP07492 148 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 G6PCP35575 357 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 OPRK1P41145 380 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 GPR12P47775 334 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 FOXG1P55316 489 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 SPCS3P61009 180 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 ZNF816Q0VGE8 651 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 EIF4EBP1Q13541 118 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 GAMTQ14353 236 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 HNF4GQ14541 408 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 IZUMO4Q1ZYL8 232 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 TMEM30BQ3MIR4 351 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 PRAMEF5Q5TYX0 476 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 PRAMEF6Q5VXH4 476 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 ZNF600Q6ZNG1 722 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 BEND4Q6ZU67 534 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 SSX7Q7RTT5 188 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 WDR86Q86TI4 376 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 FAM90A1Q86YD7 464 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 OR51G1Q8NGK1 321 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 OR52E5Q8NH55 327 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 OR4A16Q8NH70 328 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 OR1L1Q8NH94 360 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 SLC25A40Q8TBP6 338 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 FAM222BQ8WU58 562 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 CORO2AQ92828 525 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 RNASE6Q93091 150 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 R3HDM4Q96D70 268 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 OR2J1Q9GZK6 312 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 OR6C3Q9NZP0 311 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 CLN8Q9UBY8 286 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 ARL2-SNX15V9GYD0 113 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 ACANP16112 2415 aa7.17□□□□□ -1.26
CTNNA1-223ENST00000520520 ANKHD1Q8IWZ3 2542 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 MARCH11A6NNE9 402 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 A8MXE2 369 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 PHOX2AO14813 284 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 TIMM8AO60220 97 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 PAGE4O60829 102 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 HPRT1P00492 218 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 GCH1P30793 250 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 CNN1P51911 297 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 ERVS71-1P61550 626 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 COL10A1Q03692 680 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 Q3ZCU0 254 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 AARDQ4LEZ3 155 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 PDLIM3Q53GG5 364 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 ACP7Q6ZNF0 438 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 C5orf24Q7Z6I8 188 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 NECAP1Q8NC96 275 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 BEND2Q8NDZ0 799 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 WDYHV1Q96HA8 205 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 UHRF2Q96PU4 802 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 SFXN3Q9BWM7 321 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 ENY2Q9NPA8 101 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 ABCA4P78363 2273 aa7.16□□□□□ -1.26
CTNNA1-223ENST00000520520 FLNAP21333 2647 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 TRAV39A0A0B4J263 110 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 PMS2P5A8MQ11 134 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 ITGB1BP1O14713 200 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 SLC31A2O15432 143 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 MLNRO43193 412 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 IGKV1D-33P01593 117 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 IGKV1-33P01594 117 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 AMBPP02760 352 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 RD3LP0DJH9 198 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 FOSL1P15407 271 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 KITLGP21583 273 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 CD1BP29016 333 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 GPX4P36969 197 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 RAB7AP51149 207 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 ZNF718Q3SXZ3 478 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 COX19Q49B96 90 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 GFI1BQ5VTD9 330 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 Q6ZT83 130 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 MRPL52Q86TS9 123 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 MRPL41Q8IXM3 137 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 OR52L2PQ8NGH6 319 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 OR4S2Q8NH73 311 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 ADTRPQ96IZ2 230 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 NDUFAF3Q9BU61 184 aa7.15□□□□□ -1.26
CTNNA1-223ENST00000520520 TRBV9A0A0B4J1U6 114 aa7.14□□□□□ -1.27
CTNNA1-223ENST00000520520 C17orf98A8MV24 154 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms