RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 ZNF329Q86UD4 541 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 ZNF695Q8IW36 515 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 COMMD1Q8N668 190 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 MINDY2Q8NBR6 621 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 NUDT15Q9NV35 164 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 PRR13Q9NZ81 148 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 WSB1Q9Y6I7 421 aa11.34□□□□□ -0.59
USP11-212ENST00000497179 TRAV6A0A075B6T7 132 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 C15orf61A6NNL5 157 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 SNAPC5O75971 98 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 IGHG4P01861 327 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 OR4E1P0C645 316 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 MYOD1P15172 320 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 MECP2P51608 486 aaKnown RBP11.33□□□□□ -0.6
USP11-212ENST00000497179 ASPHD1Q5U4P2 390 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 UNQ5815/PRO19632Q6UWF5 114 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 NRARPQ7Z6K4 114 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 FAM219AQ8IW50 185 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 LGI3Q8N145 548 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 LFNGQ8NES3 379 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 OR4X2Q8NGF9 303 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 RRNAD1Q96FB5 475 aaKnown RBP11.33□□□□□ -0.6
USP11-212ENST00000497179 TMEM68Q96MH6 324 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 SPIN2AQ99865 258 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 SPIN2BQ9BPZ2 258 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 COMMD5Q9GZQ3 224 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 ALX4Q9H161 411 aaPredicted RBP11.33□□□□□ -0.6
USP11-212ENST00000497179 PALMDQ9NP74 551 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 PRNDQ9UKY0 176 aa11.33□□□□□ -0.6
USP11-212ENST00000497179 FOXA2Q9Y261 457 aaPredicted RBP11.33□□□□□ -0.6
USP11-212ENST00000497179 PIGBOS1A0A0B4J2F0 54 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 A0A0G2JRQ6 117 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 A0A1B0GW64 132 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 DUXBA0A1W2PPF3 345 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 C9orf170A2RU37 121 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 MSGN1A6NI15 193 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 TEX22C9J3V5 150 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 IGLV1-40P01703 118 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 HLA-AP01891 365 aaKnown RBP11.32□□□□□ -0.6
USP11-212ENST00000497179 H2AFB2P0C5Z0 115 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 CD28P10747 220 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 OR2B8PP59922 312 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 DHRS2Q13268 280 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 FOXE3Q13461 319 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 ANKRD55Q3KP44 614 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 TCTEX1D4Q5JR98 221 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 TEX38Q6PEX7 206 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 LYG2Q86SG7 212 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 SLC35G3Q8N808 338 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 RNF152Q8N8N0 203 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 LRTM2Q8N967 370 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 DUSP18Q8NEJ0 188 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 RNASE11Q8TAA1 199 aaKnown RBP11.32□□□□□ -0.6
USP11-212ENST00000497179 LSM10Q969L4 123 aaKnown RBP11.32□□□□□ -0.6
USP11-212ENST00000497179 PHB2Q99623 299 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 TMEM14BQ9NUH8 114 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 NSG2Q9Y328 171 aa11.32□□□□□ -0.6
USP11-212ENST00000497179 A0A0B4J2A0 478 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 CGB1A6NKQ9 187 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 DBX1A6NMT0 343 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 E7EUB6 86 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 PLXNB1O43157 2135 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 SOX15O60248 233 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 ELANEP08246 267 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 CD83Q01151 205 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 IZUMO4Q1ZYL8 232 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 C4orf46Q504U0 113 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 THOC7Q6I9Y2 204 aaKnown RBP11.31□□□□□ -0.6
USP11-212ENST00000497179 C11orf44Q8N8P7 122 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 OR5M8Q8NGP6 311 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 OR1L8Q8NGR8 309 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 OR4A16Q8NH70 328 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 CASTOR1Q8WTX7 329 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 FKBP11Q9NYL4 201 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 SHPKQ9UHJ6 478 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 OR51B2Q9Y5P1 312 aa11.31□□□□□ -0.6
USP11-212ENST00000497179 TNCP24821 2201 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 A0A0B4J293 547 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 TEX50A0A1B0GTY4 177 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 A0A1W2PN81 502 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 DUS4LO95620 317 aaKnown RBP11.3□□□□□ -0.6
USP11-212ENST00000497179 OPN1MWP04001 364 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 OPN1MW2P0DN77 364 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 OPN1MW3P0DN78 364 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 PSMB8P28062 276 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 CHRNA7P36544 502 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 NMSQ5H8A3 153 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 LYZL2Q7Z4W2 148 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 ZNF429Q86V71 674 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 OR5B3Q8NH48 314 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 FAM110DQ8TAY7 271 aaPredicted RBP11.3□□□□□ -0.6
USP11-212ENST00000497179 GPR146Q96CH1 333 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 FYTTD1Q96QD9 318 aaKnown RBP11.3□□□□□ -0.6
USP11-212ENST00000497179 CITED2Q99967 270 aaPredicted RBP11.3□□□□□ -0.6
USP11-212ENST00000497179 SRSF8Q9BRL6 282 aaKnown RBP11.3□□□□□ -0.6
USP11-212ENST00000497179 QTRT1Q9BXR0 403 aaKnown RBP11.3□□□□□ -0.6
USP11-212ENST00000497179 NDUFA4L2Q9NRX3 87 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 ZNF257Q9Y2Q1 563 aa11.3□□□□□ -0.6
USP11-212ENST00000497179 VWFP04275 2813 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 467 ms