RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 CT45A7P0DMV0 189 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 OR4A47Q6IF82 309 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 DTX2Q86UW9 622 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 RBMXL1Q96E39 390 aaKnown RBP12.72□□□□□ -0.37
SHISA5-216ENST00000494854 RARRES2Q99969 163 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 SLC35B3Q9H1N7 401 aa12.72□□□□□ -0.37
SHISA5-216ENST00000494854 C15orf61A6NNL5 157 aa12.71□□□□□ -0.37
SHISA5-216ENST00000494854 HRASP01112 189 aa12.71□□□□□ -0.37
SHISA5-216ENST00000494854 RIPPLY3P57055 190 aa12.71□□□□□ -0.37
SHISA5-216ENST00000494854 RPP30P78346 268 aaKnown RBP12.71□□□□□ -0.37
SHISA5-216ENST00000494854 POU2AF1Q16633 256 aa12.71□□□□□ -0.37
SHISA5-216ENST00000494854 VWC2Q2TAL6 325 aa12.71□□□□□ -0.37
SHISA5-216ENST00000494854 ZNF833PQ6ZTB9 187 aa12.71□□□□□ -0.37
SHISA5-216ENST00000494854 CENPVQ7Z7K6 275 aaPredicted RBP12.71□□□□□ -0.37
SHISA5-216ENST00000494854 CLRN3Q8NCR9 226 aa12.71□□□□□ -0.37
SHISA5-216ENST00000494854 TRAV1-1A0A0B4J248 108 aa12.7□□□□□ -0.38
SHISA5-216ENST00000494854 VDAC2P45880 294 aaPredicted RBP12.7□□□□□ -0.38
SHISA5-216ENST00000494854 RTL8BQ17RB0 113 aa12.7□□□□□ -0.38
SHISA5-216ENST00000494854 TMEM41BQ5BJD5 291 aa12.7□□□□□ -0.38
SHISA5-216ENST00000494854 DHRS7BQ6IAN0 325 aaPredicted RBP12.7□□□□□ -0.38
SHISA5-216ENST00000494854 TMEM88Q6PEY1 159 aa12.7□□□□□ -0.38
SHISA5-216ENST00000494854 RAB39BQ96DA2 213 aa12.7□□□□□ -0.38
SHISA5-216ENST00000494854 HEYLQ9NQ87 328 aaPredicted RBP12.7□□□□□ -0.38
SHISA5-216ENST00000494854 SLC35D1Q9NTN3 355 aa12.7□□□□□ -0.38
SHISA5-216ENST00000494854 TCF19Q9Y242 345 aa12.7□□□□□ -0.38
SHISA5-216ENST00000494854 FGF7P21781 194 aa12.7□□□□□ -0.38
SHISA5-216ENST00000494854 ELLP55199 621 aaPredicted RBP12.7□□□□□ -0.38
SHISA5-216ENST00000494854 ZNF726P1Q15940 193 aa12.7□□□□□ -0.38
SHISA5-216ENST00000494854 C17orf50Q8WW18 174 aa12.7□□□□□ -0.38
SHISA5-216ENST00000494854 FOXA2Q9Y261 457 aaPredicted RBP12.7□□□□□ -0.38
SHISA5-216ENST00000494854 IFNA10P01566 189 aa12.69□□□□□ -0.38
SHISA5-216ENST00000494854 COL8A2P25067 703 aa12.69□□□□□ -0.38
SHISA5-216ENST00000494854 ATP5J2P56134 94 aa12.69□□□□□ -0.38
SHISA5-216ENST00000494854 HAGHQ16775 308 aa12.69□□□□□ -0.38
SHISA5-216ENST00000494854 CBLN2Q8IUK8 224 aa12.69□□□□□ -0.38
SHISA5-216ENST00000494854 OR13D1Q8NGV5 346 aa12.69□□□□□ -0.38
SHISA5-216ENST00000494854 MBD3L1Q8WWY6 194 aa12.69□□□□□ -0.38
SHISA5-216ENST00000494854 RCC1LQ96I51 464 aaKnown RBP12.69□□□□□ -0.38
SHISA5-216ENST00000494854 TMEM14BQ9NUH8 114 aa12.69□□□□□ -0.38
SHISA5-216ENST00000494854 ZFHX3Q15911 3703 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 LYNX1G3V0Z9 82 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 IGKV1-16P04430 117 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 OR13C7P0DN81 318 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 LYNX1P0DP58 116 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 ATF4P18848 351 aaPredicted RBP12.68□□□□□ -0.38
SHISA5-216ENST00000494854 HOXA1P49639 335 aaPredicted RBP12.68□□□□□ -0.38
SHISA5-216ENST00000494854 PPOXP50336 477 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 DLX6P56179 175 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 HNF4GQ14541 408 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 TMEM155Q4W5P6 130 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 CLDND2Q8NHS1 167 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 Q96MF0 132 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 NIPBLQ6KC79 2804 aaeCLIP12.68□□□□□ -0.38
SHISA5-216ENST00000494854 NF1P21359 2839 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 LOC105371267A0A1B0GV96 52 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 MDKP21741 143 aaPredicted RBP12.68□□□□□ -0.38
SHISA5-216ENST00000494854 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
SHISA5-216ENST00000494854 ZNF506Q5JVG8 444 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 LCN15Q6UWW0 184 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 SSX7Q7RTT5 188 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 LINC00311Q8N616 119 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 C8orf31Q8N9H6 132 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 ZNF596Q8TC21 504 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 NPCDR1Q9BY65 106 aa12.68□□□□□ -0.38
SHISA5-216ENST00000494854 MRPL20Q9BYC9 149 aaKnown RBP12.68□□□□□ -0.38
SHISA5-216ENST00000494854 J3QR06 171 aa12.67□□□□□ -0.38
SHISA5-216ENST00000494854 RRHO14718 337 aa12.67□□□□□ -0.38
SHISA5-216ENST00000494854 IL6RP08887 468 aaPredicted RBP12.67□□□□□ -0.38
SHISA5-216ENST00000494854 ICAM4Q14773 271 aa12.67□□□□□ -0.38
SHISA5-216ENST00000494854 C11orf71Q6IPW1 123 aa12.67□□□□□ -0.38
SHISA5-216ENST00000494854 ACSM6Q6P461 480 aa12.67□□□□□ -0.38
SHISA5-216ENST00000494854 ETV3LQ6ZN32 361 aa12.67□□□□□ -0.38
SHISA5-216ENST00000494854 OR10X1Q8NGY0 326 aa12.67□□□□□ -0.38
SHISA5-216ENST00000494854 AIFM2Q9BRQ8 373 aa12.67□□□□□ -0.38
SHISA5-216ENST00000494854 CBLN4Q9NTU7 201 aa12.67□□□□□ -0.38
SHISA5-216ENST00000494854 TRBV23-1A0A0A0MS06 115 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 SRRM4A7MD48 611 aaKnown RBP12.66□□□□□ -0.38
SHISA5-216ENST00000494854 FSTL3O95633 263 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 IGKV1D-33P01593 117 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 IGKV1-33P01594 117 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 APOA2P02652 100 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 CD1BP29016 333 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 FAM71F2Q6NXP2 309 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 ABHD12Q8N2K0 398 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 PRNDQ9UKY0 176 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 A0A087X0M5 115 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 A0A1B0GX30 115 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 C17orf112F2Z3M2 114 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 H0YJW9 148 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 UPK2O00526 184 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 IGHV2-70P01814 119 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 MBP02144 154 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 HSPB1P04792 205 aaKnown RBP12.66□□□□□ -0.38
SHISA5-216ENST00000494854 SRP19P09132 144 aaKnown RBP12.66□□□□□ -0.38
SHISA5-216ENST00000494854 IGHV1-8P0DP01 117 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 CDKN1AP38936 164 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
SHISA5-216ENST00000494854 RAB11AP62491 216 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 KHDC3LQ587J8 217 aa12.66□□□□□ -0.38
SHISA5-216ENST00000494854 SOHLH1Q5JUK2 328 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms