RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 LHFPL5Q8TAF8 219 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 SEC22AQ96IW7 307 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 ALX4Q9H161 411 aaPredicted RBP8.68□□□□□ -1.02
APTX-230ENST00000494649 COA4Q9NYJ1 87 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 BET1LQ9NYM9 111 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 FOXA2Q9Y261 457 aaPredicted RBP8.68□□□□□ -1.02
APTX-230ENST00000494649 CRYM-AS1A6NIL9 109 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 RBMXL2O75526 392 aaKnown RBP8.68□□□□□ -1.02
APTX-230ENST00000494649 IGKV1-5P01602 117 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 IL6RP08887 468 aaPredicted RBP8.68□□□□□ -1.02
APTX-230ENST00000494649 AREGP15514 252 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 VAMP1P23763 118 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 CD40LGP29965 261 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 RPL27AP46776 148 aaKnown RBP8.68□□□□□ -1.02
APTX-230ENST00000494649 AKIRIN2Q53H80 203 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 C19orf54Q5BKX5 351 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 H2BFWTQ7Z2G1 175 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 NDUFA11Q86Y39 141 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 OR10W1Q8NGF6 305 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 RNASE11Q8TAA1 199 aaKnown RBP8.68□□□□□ -1.02
APTX-230ENST00000494649 GLYATL2Q8WU03 294 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 S100ZQ8WXG8 99 aa8.68□□□□□ -1.02
APTX-230ENST00000494649 A0A0G2JRQ6 117 aa8.67□□□□□ -1.02
APTX-230ENST00000494649 CGB1A6NKQ9 187 aa8.67□□□□□ -1.02
APTX-230ENST00000494649 CREBL2O60519 120 aaPredicted RBP8.67□□□□□ -1.02
APTX-230ENST00000494649 NXPH3O95157 252 aa8.67□□□□□ -1.02
APTX-230ENST00000494649 RAB9AP51151 201 aa8.67□□□□□ -1.02
APTX-230ENST00000494649 TPPP2P59282 170 aa8.67□□□□□ -1.02
APTX-230ENST00000494649 RPL23AP62750 156 aaKnown RBP8.67□□□□□ -1.02
APTX-230ENST00000494649 SUPT4H1P63272 117 aaKnown RBP8.67□□□□□ -1.02
APTX-230ENST00000494649 FOXE3Q13461 319 aa8.67□□□□□ -1.02
APTX-230ENST00000494649 SGPP2Q8IWX5 399 aa8.67□□□□□ -1.02
APTX-230ENST00000494649 COMMD5Q9GZQ3 224 aa8.67□□□□□ -1.02
APTX-230ENST00000494649 GNB4Q9HAV0 340 aa8.67□□□□□ -1.02
APTX-230ENST00000494649 CENPXA8MT69 81 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 TEX22C9J3V5 150 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 LYRM1O43325 122 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 IGLV1-40P01703 118 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 TRGV3P03979 118 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 IFITM3Q01628 133 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 ZNF846Q147U1 533 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 RBMS2Q15434 407 aaKnown RBP8.66□□□□□ -1.02
APTX-230ENST00000494649 POU2AF1Q16633 256 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 TMEM268Q5VZI3 342 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 SCGB3A2Q96PL1 93 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 AIFM2Q9BRQ8 373 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 CCDC32Q9BV29 185 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 TMEM222Q9H0R3 208 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 SNAPC5O75971 98 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 ELANEP08246 267 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 ANXA7P20073 488 aaKnown RBP8.66□□□□□ -1.02
APTX-230ENST00000494649 UCP1P25874 307 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 CRIP2P52943 208 aaPredicted RBP8.66□□□□□ -1.02
APTX-230ENST00000494649 RAB25P57735 213 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 ZNF695Q8IW36 515 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 CENPSQ8N2Z9 138 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 TCTEX1D1Q8N7M0 179 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 OR4A16Q8NH70 328 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 SPIN2AQ99865 258 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 SPIN2BQ9BPZ2 258 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 QTRT1Q9BXR0 403 aaKnown RBP8.66□□□□□ -1.02
APTX-230ENST00000494649 WDR12Q9GZL7 423 aaKnown RBP8.66□□□□□ -1.02
APTX-230ENST00000494649 TBC1D24Q9ULP9 559 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 OR51B2Q9Y5P1 312 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 S4R3C0 116 aa8.66□□□□□ -1.02
APTX-230ENST00000494649 TRAV6A0A075B6T7 132 aa8.65□□□□□ -1.02
APTX-230ENST00000494649 TEX50A0A1B0GTY4 177 aa8.65□□□□□ -1.02
APTX-230ENST00000494649 NDUFB6O95139 128 aa8.65□□□□□ -1.02
APTX-230ENST00000494649 PF4P02776 101 aa8.65□□□□□ -1.02
APTX-230ENST00000494649 PPP1R1AQ13522 171 aa8.65□□□□□ -1.02
APTX-230ENST00000494649 TREML4Q6UXN2 200 aa8.65□□□□□ -1.02
APTX-230ENST00000494649 SELENOHQ8IZQ5 122 aaKnown RBP8.65□□□□□ -1.02
APTX-230ENST00000494649 COMMD1Q8N668 190 aa8.65□□□□□ -1.02
APTX-230ENST00000494649 SLC35G3Q8N808 338 aa8.65□□□□□ -1.02
APTX-230ENST00000494649 OR4A5Q8NH83 315 aa8.65□□□□□ -1.02
APTX-230ENST00000494649 SLC25A21Q9BQT8 299 aaPredicted RBP8.65□□□□□ -1.02
APTX-230ENST00000494649 NAP1L6A6NFF2 107 aa8.65□□□□□ -1.03
APTX-230ENST00000494649 CDS2O95674 445 aa8.65□□□□□ -1.03
APTX-230ENST00000494649 KIAA0141Q14154 515 aaPredicted RBP8.65□□□□□ -1.03
APTX-230ENST00000494649 TMEM187Q14656 261 aa8.65□□□□□ -1.03
APTX-230ENST00000494649 Q6ZRM9 215 aa8.65□□□□□ -1.03
APTX-230ENST00000494649 LINC00299Q6ZSB3 139 aa8.65□□□□□ -1.03
APTX-230ENST00000494649 ZNF491Q8N8L2 437 aa8.65□□□□□ -1.03
APTX-230ENST00000494649 OR5M8Q8NGP6 311 aa8.65□□□□□ -1.03
APTX-230ENST00000494649 RBPMSQ93062 196 aaKnown RBP8.65□□□□□ -1.03
APTX-230ENST00000494649 RRNAD1Q96FB5 475 aaKnown RBP8.65□□□□□ -1.03
APTX-230ENST00000494649 KCNIP3Q9Y2W7 256 aa8.65□□□□□ -1.03
APTX-230ENST00000494649 CMYA5Q8N3K9 4069 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 A0A0B4J293 547 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 C15orf61A6NNL5 157 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 UPK1BO75841 260 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 OR2J3O76001 311 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 IGHV3-23P01764 117 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 MECP2P51608 486 aaKnown RBP8.64□□□□□ -1.03
APTX-230ENST00000494649 ANKRD55Q3KP44 614 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 TMEM128Q5BJH2 165 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 PRR31Q5SQ13 230 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 LYZL2Q7Z4W2 148 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 OR4F17Q8NGA8 305 aa8.64□□□□□ -1.03
APTX-230ENST00000494649 DEDD2Q8WXF8 326 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms