RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ACTL6BO94805 426 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 SRSF2Q01130 221 aaKnown RBP15.38■□□□□ 0.05
USP39-218ENST00000493829 C16orf82Q7Z2V1 217 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 MMD2Q8IY49 270 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 TMEM86BQ8N661 226 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 GRPEL2Q8TAA5 225 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 ABHD5Q8WTS1 349 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 TAF15Q92804 592 aaKnown RBP eCLIP15.38■□□□□ 0.05
USP39-218ENST00000493829 C2orf50Q96LR7 162 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 PRNDQ9UKY0 176 aa15.38■□□□□ 0.05
USP39-218ENST00000493829 FGF16O43320 207 aa15.37■□□□□ 0.05
USP39-218ENST00000493829 CNIH1O95406 144 aa15.37■□□□□ 0.05
USP39-218ENST00000493829 APELAP0DMC3 54 aa15.37■□□□□ 0.05
USP39-218ENST00000493829 HILS1P60008 231 aa15.37■□□□□ 0.05
USP39-218ENST00000493829 BLCAPP62952 87 aa15.37■□□□□ 0.05
USP39-218ENST00000493829 LRRC37A5PQ49AS3 106 aa15.37■□□□□ 0.05
USP39-218ENST00000493829 CXorf66Q5JRM2 361 aaPredicted RBP15.37■□□□□ 0.05
USP39-218ENST00000493829 FOXRED2Q8IWF2 684 aa15.37■□□□□ 0.05
USP39-218ENST00000493829 ZNF436Q9C0F3 470 aaPredicted RBP15.37■□□□□ 0.05
USP39-218ENST00000493829 COMMD5Q9GZQ3 224 aa15.37■□□□□ 0.05
USP39-218ENST00000493829 MAGT1Q9H0U3 335 aa15.37■□□□□ 0.05
USP39-218ENST00000493829 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.37■□□□□ 0.05
USP39-218ENST00000493829 FOXA2Q9Y261 457 aaPredicted RBP15.37■□□□□ 0.05
USP39-218ENST00000493829 IFNA17P01571 189 aa15.36■□□□□ 0.05
USP39-218ENST00000493829 S100A10P60903 97 aa15.36■□□□□ 0.05
USP39-218ENST00000493829 SSBP2P81877 361 aaPredicted RBP15.36■□□□□ 0.05
USP39-218ENST00000493829 NDPQ00604 133 aa15.36■□□□□ 0.05
USP39-218ENST00000493829 C11orf87Q6NUJ2 197 aa15.36■□□□□ 0.05
USP39-218ENST00000493829 FYTTD1Q96QD9 318 aaKnown RBP15.36■□□□□ 0.05
USP39-218ENST00000493829 FAM103A1Q9BTL3 118 aaKnown RBP15.36■□□□□ 0.05
USP39-218ENST00000493829 TMEM14BQ9NUH8 114 aa15.36■□□□□ 0.05
USP39-218ENST00000493829 HLA-DRB1P01911 266 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 CX3CL1P78423 397 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 Q6ZS46 218 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 OR4D5Q8NGN0 318 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 PARP11Q9NR21 331 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 TET2Q6N021 2002 aaPredicted RBP15.35■□□□□ 0.05
USP39-218ENST00000493829 IGHV7-81A0A0B4J1V7 117 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 TEX50A0A1B0GTY4 177 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 E7EUB6 86 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 M0QZK8 103 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 PITX3O75364 302 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 SLC25A6P12236 298 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 COMPP49747 757 aaPredicted RBP15.35■□□□□ 0.05
USP39-218ENST00000493829 FXYD3Q14802 87 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 COA4Q9NYJ1 87 aa15.35■□□□□ 0.05
USP39-218ENST00000493829 LSM5Q9Y4Y9 91 aaKnown RBP15.35■□□□□ 0.05
USP39-218ENST00000493829 FAM181BA6NEQ2 426 aa15.34■□□□□ 0.05
USP39-218ENST00000493829 LINC01548A6NM66 108 aa15.34■□□□□ 0.05
USP39-218ENST00000493829 TCF21O43680 179 aa15.34■□□□□ 0.05
USP39-218ENST00000493829 NKX2-1P43699 371 aaPredicted RBP15.34■□□□□ 0.05
USP39-218ENST00000493829 RPL27AP46776 148 aaKnown RBP15.34■□□□□ 0.05
USP39-218ENST00000493829 UBA52P62987 128 aaKnown RBP15.34■□□□□ 0.05
USP39-218ENST00000493829 SRSF12Q8WXF0 261 aaKnown RBP15.34■□□□□ 0.05
USP39-218ENST00000493829 ARPC1AQ92747 370 aa15.34■□□□□ 0.05
USP39-218ENST00000493829 A0A1B0GW64 132 aa15.33■□□□□ 0.04
USP39-218ENST00000493829 MBPP02686 304 aaPredicted RBP15.33■□□□□ 0.04
USP39-218ENST00000493829 HOXA1P49639 335 aaPredicted RBP15.33■□□□□ 0.04
USP39-218ENST00000493829 TNFRSF9Q07011 255 aa15.33■□□□□ 0.04
USP39-218ENST00000493829 RAB32Q13637 225 aa15.33■□□□□ 0.04
USP39-218ENST00000493829 TMEM95Q3KNT9 176 aa15.33■□□□□ 0.04
USP39-218ENST00000493829 ZNF429Q86V71 674 aa15.33■□□□□ 0.04
USP39-218ENST00000493829 JMJD8Q96S16 334 aa15.33■□□□□ 0.04
USP39-218ENST00000493829 NPFFR1Q9GZQ6 430 aa15.33■□□□□ 0.04
USP39-218ENST00000493829 RBKSQ9H477 322 aa15.33■□□□□ 0.04
USP39-218ENST00000493829 RANGRFQ9HD47 186 aaPredicted RBP15.33■□□□□ 0.04
USP39-218ENST00000493829 FKBP11Q9NYL4 201 aa15.33■□□□□ 0.04
USP39-218ENST00000493829 FBXO7Q9Y3I1 522 aa15.33■□□□□ 0.04
USP39-218ENST00000493829 CGB1A6NKQ9 187 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 CEBPZOSA8MTT3 80 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 SMLR1H3BR10 107 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 ATP6V0E1O15342 81 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 PLXNB1O43157 2135 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 SSSCA1O60232 199 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 RNASE1P07998 156 aaKnown RBP15.32■□□□□ 0.04
USP39-218ENST00000493829 IAPPP10997 89 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 POLR2GP62487 172 aaKnown RBP eCLIP15.32■□□□□ 0.04
USP39-218ENST00000493829 ARSJQ5FYB0 599 aaPredicted RBP15.32■□□□□ 0.04
USP39-218ENST00000493829 AKAP14Q86UN6 197 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 OR10W1Q8NGF6 305 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 OR1L8Q8NGR8 309 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 NMES1Q9C002 83 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 HSPB7Q9UBY9 170 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 LINC00527Q9UJ94 153 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 CLDN34H7C241 214 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 TRIM77I1YAP6 450 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 WRBO00258 174 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 CCNKO75909 580 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 FGF2P09038 288 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 GIPP09681 153 aaPredicted RBP15.32■□□□□ 0.04
USP39-218ENST00000493829 TRAPPC2P0DI81 140 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 TRAPPC2BP0DI82 140 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 MAS1LP35410 378 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 HSPE1P61604 102 aaKnown RBP15.32■□□□□ 0.04
USP39-218ENST00000493829 ZNF562Q6V9R5 426 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 OR5B3Q8NH48 314 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 PPP1R1CQ8WVI7 109 aa15.32■□□□□ 0.04
USP39-218ENST00000493829 TNCP24821 2201 aa15.31■□□□□ 0.04
USP39-218ENST00000493829 MSGN1A6NI15 193 aa15.31■□□□□ 0.04
USP39-218ENST00000493829 REG1AP05451 166 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms