RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 ZNF257Q9Y2Q1 563 aa8.25□□□□□ -1.09
CDC42SE1-206ENST00000492796 NOTCH1P46531 2555 aa8.25□□□□□ -1.09
CDC42SE1-206ENST00000492796 DPPA5A6NC42 116 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 FAM223BA6NKX1 122 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 NPIPB5A8MRT5 1133 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 DISC1C4P0D8 188 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 DHFRP00374 187 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 IGHV3-11P01762 117 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 HSPB1P04792 205 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 APELAP0DMC3 54 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 RPA2P15927 270 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 PTBP1P26599 531 aaKnown RBP eCLIP8.24□□□□□ -1.093e-6■■□□□ 13.6
CDC42SE1-206ENST00000492796 PPP5CP53041 499 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 SURF2Q15527 256 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 ZNF585BQ52M93 769 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 C9orf66Q5T8R8 295 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 FAM223AQ8IWN6 122 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 CCDC71LQ8N9Z2 235 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 ZFAND1Q8TCF1 268 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 FYTTD1Q96QD9 318 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 TSC22D3Q99576 134 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 SRSF8Q9BRL6 282 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 COMMD5Q9GZQ3 224 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 ALX4Q9H161 411 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 NDUFA13Q9P0J0 144 aa8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 ZMAT5Q9UDW3 170 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-206ENST00000492796 TNCP24821 2201 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 DNAH3Q8TD57 4116 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 IGHV4OR15-8A0A075B7B6 117 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 A0A087WW49 117 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 TRBV9A0A0B4J1U6 114 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 ANKRD20A5PA0PJZ0 165 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 E7EUB6 86 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 H0Y980 276 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 B3GALNT1O75752 331 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 KRASP01116 189 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 CRYGCP07315 174 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 CTSDP07339 412 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 PIGPP57054 158 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 EGFEM1PQ0D2K5 195 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 FAM209BQ5JX69 171 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 NECAP1Q8NC96 275 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 OR4C16Q8NGL9 310 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 PRRT1Q99946 306 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 RANGRFQ9HD47 186 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 SLC2A8Q9NY64 477 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 COPZ2Q9P299 210 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 V9GYH0 126 aa8.23□□□□□ -1.09
CDC42SE1-206ENST00000492796 TRAV3A0A0B4J244 114 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 A0A1B0GW64 132 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 HMX3A6NHT5 357 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 CGB1A6NKQ9 187 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 SEC14L6B5MCN3 397 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 OVOL1O14753 267 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 SNAPC5O75971 98 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 SERPINE2P07093 398 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 ZP3P21754 424 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 PSMB6P28072 239 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 G6PCP35575 357 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 INSL3P51460 131 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 OR2B8PP59922 312 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 RHOGP84095 191 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 ZNF45Q02386 682 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 KLK9Q2XQG4 91 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 FAAP20Q6NZ36 180 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 ZNF343Q6P1L6 599 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 HSD17B13Q7Z5P4 300 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 CCDC190Q86UF4 302 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 OR13C8Q8NGS7 320 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 MARCH1Q8TCQ1 289 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 THAP7Q9BT49 309 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 QTRT1Q9BXR0 403 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 AURKAIP1Q9NWT8 199 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 FKBP11Q9NYL4 201 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 SCP2D1Q9UJQ7 156 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 KLK9Q9UKQ9 250 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 PRNDQ9UKY0 176 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 C14orf166Q9Y224 244 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 TGP01266 2768 aa8.22□□□□□ -1.09
CDC42SE1-206ENST00000492796 C3orf85A0A1B0GTC6 90 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 IGLC7A0M8Q6 106 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 C15orf61A6NNL5 157 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 ATG12O94817 140 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 PRH1P02810 166 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 MYOD1P15172 320 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 HIST1H1BP16401 226 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 CTRB1P17538 263 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 PI3P19957 117 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 HOXD3P31249 432 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 FAUP35544 74 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 ETV6P41212 452 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 SLURP1P55000 103 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 AP3S2P59780 193 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 DEFA5Q01523 94 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 ATP5G2Q06055 141 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 PYDC2Q56P42 97 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 SPANXN2Q5MJ10 180 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 CTRB2Q6GPI1 263 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 Q8N402 240 aa8.21□□□□□ -1.1
CDC42SE1-206ENST00000492796 OR1L8Q8NGR8 309 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms