RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 KRTAP21-3Q3LHN1 58 aa14.02□□□□□ -0.16
CPNE1-224ENST00000483359 CHPT1Q8WUD6 406 aa14.02□□□□□ -0.16
CPNE1-224ENST00000483359 RRNAD1Q96FB5 475 aaKnown RBP14.02□□□□□ -0.16
CPNE1-224ENST00000483359 TMEM56Q96MV1 263 aa14.02□□□□□ -0.16
CPNE1-224ENST00000483359 FYTTD1Q96QD9 318 aaKnown RBP14.02□□□□□ -0.16
CPNE1-224ENST00000483359 TMEM56-RWDD3S4R434 201 aa14.02□□□□□ -0.16
CPNE1-224ENST00000483359 TRAV41A0A0B4J266 112 aa14.02□□□□□ -0.17
CPNE1-224ENST00000483359 DBX1A6NMT0 343 aa14.02□□□□□ -0.17
CPNE1-224ENST00000483359 E7EUB6 86 aa14.02□□□□□ -0.17
CPNE1-224ENST00000483359 ATG12O94817 140 aa14.02□□□□□ -0.17
CPNE1-224ENST00000483359 IL6RP08887 468 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-224ENST00000483359 UBE2MP61081 183 aaKnown RBP14.02□□□□□ -0.17
CPNE1-224ENST00000483359 LYZL2Q7Z4W2 148 aa14.02□□□□□ -0.17
CPNE1-224ENST00000483359 LGI3Q8N145 548 aa14.02□□□□□ -0.17
CPNE1-224ENST00000483359 C3orf56Q8N813 242 aa14.02□□□□□ -0.17
CPNE1-224ENST00000483359 SGMS2Q8NHU3 365 aa14.02□□□□□ -0.17
CPNE1-224ENST00000483359 STAB1Q9NY15 2570 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 MSGN1A6NI15 193 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 SNAPC5O75971 98 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 SPNP16150 400 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 DCTN2Q13561 401 aaKnown RBP14.01□□□□□ -0.17
CPNE1-224ENST00000483359 PLET1Q6UQ28 207 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 UNQ5815/PRO19632Q6UWF5 114 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 LYG2Q86SG7 212 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 OR5AU1Q8NGC0 362 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 SEC22CQ9BRL7 303 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 COMMD5Q9GZQ3 224 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 PALMDQ9NP74 551 aa14.01□□□□□ -0.17
CPNE1-224ENST00000483359 A0A1W2PN81 502 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 CHRNA7P36544 502 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 RPL27AP46776 148 aaKnown RBP14□□□□□ -0.17
CPNE1-224ENST00000483359 SRPXP78539 464 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 DUSP18Q8NEJ0 188 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 OR4A16Q8NH70 328 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 HMX3A6NHT5 357 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 C15orf61A6NNL5 157 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 SLC35B1P78383 322 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 LCNL1Q6ZST4 164 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 HINT2Q9BX68 163 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 OR51B2Q9Y5P1 312 aa14□□□□□ -0.17
CPNE1-224ENST00000483359 A0A1B0GW64 132 aa13.99□□□□□ -0.17
CPNE1-224ENST00000483359 P0C879 139 aa13.99□□□□□ -0.17
CPNE1-224ENST00000483359 CD28P10747 220 aa13.99□□□□□ -0.17
CPNE1-224ENST00000483359 MAS1LP35410 378 aa13.99□□□□□ -0.17
CPNE1-224ENST00000483359 IL22RA2Q969J5 263 aa13.99□□□□□ -0.17
CPNE1-224ENST00000483359 GON7Q9BXV9 100 aa13.99□□□□□ -0.17
CPNE1-224ENST00000483359 A0A0B4J2A0 478 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 NXPH3O95157 252 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 TMEM267Q0VDI3 215 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-224ENST00000483359 ASPHD1Q5U4P2 390 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 Q6ZRM9 215 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 WIPF2Q8TF74 440 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-224ENST00000483359 GPR146Q96CH1 333 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 QTRT1Q9BXR0 403 aaKnown RBP13.98□□□□□ -0.17
CPNE1-224ENST00000483359 ALX4Q9H161 411 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-224ENST00000483359 CACNG5Q9UF02 275 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 SHPKQ9UHJ6 478 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 PRNDQ9UKY0 176 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 TET2Q6N021 2002 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-224ENST00000483359 A0A0B4J293 547 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 CGB1A6NKQ9 187 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 HOXB5P09067 269 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 CFHR3Q02985 330 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 SPINK9Q5DT21 86 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 KHDC1LQ5JSQ8 128 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 OR5T1Q8NG75 326 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 OR4X2Q8NGF9 303 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 COQ8AQ8NI60 647 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 SPIN2AQ99865 258 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 SPIN2BQ9BPZ2 258 aa13.98□□□□□ -0.17
CPNE1-224ENST00000483359 TEX50A0A1B0GTY4 177 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 TEX22C9J3V5 150 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 INMT-MINDY4F8WBC2 141 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 SOX15O60248 233 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 FBXO24O75426 580 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 DUS4LO95620 317 aaKnown RBP13.97□□□□□ -0.17
CPNE1-224ENST00000483359 PTTG1O95997 202 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 REG1AP05451 166 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 PPIFP30405 207 aaKnown RBP13.97□□□□□ -0.17
CPNE1-224ENST00000483359 MECP2P51608 486 aaKnown RBP13.97□□□□□ -0.17
CPNE1-224ENST00000483359 CRIP2P52943 208 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-224ENST00000483359 AKIRIN2Q53H80 203 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 C19orf54Q5BKX5 351 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 C19orf35Q6ZS72 473 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 OR10W1Q8NGF6 305 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 TMEM14BQ9NUH8 114 aa13.97□□□□□ -0.17
CPNE1-224ENST00000483359 ADAP1O75689 374 aa13.96□□□□□ -0.17
CPNE1-224ENST00000483359 AREGP15514 252 aa13.96□□□□□ -0.17
CPNE1-224ENST00000483359 NMSQ5H8A3 153 aa13.96□□□□□ -0.17
CPNE1-224ENST00000483359 TCTEX1D4Q5JR98 221 aa13.96□□□□□ -0.17
CPNE1-224ENST00000483359 FAM219AQ8IW50 185 aa13.96□□□□□ -0.17
CPNE1-224ENST00000483359 LRTM2Q8N967 370 aa13.96□□□□□ -0.17
CPNE1-224ENST00000483359 UXS1Q8NBZ7 420 aa13.96□□□□□ -0.17
CPNE1-224ENST00000483359 LSM10Q969L4 123 aaKnown RBP13.96□□□□□ -0.17
CPNE1-224ENST00000483359 ZNF355PQ9NSJ1 428 aa13.96□□□□□ -0.17
CPNE1-224ENST00000483359 ZNF580Q9UK33 172 aa13.96□□□□□ -0.17
CPNE1-224ENST00000483359 FOXA2Q9Y261 457 aaPredicted RBP13.96□□□□□ -0.17
CPNE1-224ENST00000483359 TEX38Q6PEX7 206 aa13.96□□□□□ -0.18
CPNE1-224ENST00000483359 CADM3Q8N126 398 aa13.96□□□□□ -0.18
CPNE1-224ENST00000483359 MINDY2Q8NBR6 621 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms