RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RBM11P57052 281 aaKnown RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 ZNF124Q15973 351 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 GAGE13Q4V321 117 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 MBNL2Q5VZF2 373 aaKnown RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 MRPL55Q7Z7F7 128 aaKnown RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 SLX1AQ9BQ83 275 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 MRPL42Q9Y6G3 142 aaKnown RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 C8orf88P0DMB2 117 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 AGAP20933 346 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 LCN2P80188 198 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 RPL18Q07020 188 aaKnown RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 Q6ZWC4 215 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 IMMP2LQ96T52 175 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 SMOC1Q9H4F8 434 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 CALYQ9NYX4 217 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 MRM2Q9UI43 246 aaKnown RBP4.68□□□□□ -1.66
USF3-202ENST00000478658 GREB1Q4ZG55 1949 aa4.68□□□□□ -1.66
USF3-202ENST00000478658 TRBV5-5A0A0J9YX44 114 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 CST7O76096 145 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 VPREB1P12018 145 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 FAM72AQ5TYM5 149 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 CASC2Q6XLA1 102 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 SLC25A48Q6ZT89 311 aaKnown RBP4.67□□□□□ -1.66
USF3-202ENST00000478658 COX14Q96I36 57 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 MEGF9Q9H1U4 602 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 RHODO00212 210 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 PROP1O75360 226 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 TEX43Q6ZNM6 134 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 LINC01551Q86U37 167 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 FAM168AQ92567 244 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 PLSCR4Q9NRQ2 329 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 FUT9Q9Y231 359 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 RGPD2P0DJD1 1756 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 C9orf170A2RU37 121 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 GASTP01350 101 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 HBDP02042 147 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 APOHP02749 345 aaPredicted RBP4.67□□□□□ -1.66
USF3-202ENST00000478658 LMO1P25800 156 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 ZNF585BQ52M93 769 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 Q6ZSR9 355 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 C8orf31Q8N9H6 132 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 IL17FQ96PD4 163 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 hADV29S1A0JD25 119 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 TMEM233B4DJY2 109 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 SNAI1O95863 264 aaPredicted RBP4.67□□□□□ -1.66
USF3-202ENST00000478658 OR2H2O95918 312 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 TCRAP04437 139 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 C9orf153Q5TBE3 101 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 C9orf47Q6ZRZ4 202 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 TM2D2Q9BX73 214 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 TRAV2A0A0B4J234 112 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 LOC390937A0A1W2PQ73 354 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 C9JCJ5 164 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 TRGV3P03979 118 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 C1orf220Q5T0J3 134 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 LCN12Q6JVE5 192 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 SIGLEC15Q6ZMC9 328 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 C5AR2Q9P296 337 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 NWD2Q9ULI1 1742 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 WNK2Q9Y3S1 2297 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 A0A087WUJ7 227 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 EPPINO95925 133 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 PDE6GP18545 87 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 GATA3P23771 443 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 C6orf226Q5I0X4 101 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 ZAR1Q86SH2 424 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 ZNF680Q8NEM1 530 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 PLPPR1Q8TBJ4 325 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 TRPM7Q96QT4 1865 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 SYPL1Q16563 259 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 BCDIN3DQ7Z5W3 292 aaKnown RBP4.67□□□□□ -1.66
USF3-202ENST00000478658 TMEM174Q8WUU8 243 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 FGF11Q92914 225 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 C1QTNF5Q9BXJ0 243 aa4.67□□□□□ -1.66
USF3-202ENST00000478658 LYRM9A8MSI8 78 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 MS4A6EQ96DS6 147 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 KLF16Q9BXK1 252 aaPredicted RBP4.66□□□□□ -1.66
USF3-202ENST00000478658 RPP21Q9H633 154 aaKnown RBP4.66□□□□□ -1.66
USF3-202ENST00000478658 THAP10Q9P2Z0 257 aaPredicted RBP4.66□□□□□ -1.66
USF3-202ENST00000478658 CEP250Q9BV73 2442 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 VCYO14598 125 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 PVRIGQ6DKI7 326 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 TMEFF1Q8IYR6 380 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 FGF20Q9NP95 211 aaPredicted RBP4.66□□□□□ -1.66
USF3-202ENST00000478658 IGKV3D-15A0A087WSY6 115 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 CXCL13O43927 109 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 IGKV3-15P01624 115 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 IGHV4-39P01824 125 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 RCC1P18754 421 aaPredicted RBP4.66□□□□□ -1.66
USF3-202ENST00000478658 HSD52Q0P140 79 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 ISCA2Q86U28 154 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 EMC6Q9BV81 110 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 ZMAT3Q9HA38 289 aaKnown RBP4.66□□□□□ -1.66
USF3-202ENST00000478658 LHX9Q9NQ69 397 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 CLPSL1A2RUU4 121 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 GRIFINA4D1Z8 144 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 PRTN3P24158 256 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 LHX2P50458 406 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 ZP1P60852 638 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 DEFB123Q8N688 67 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms