RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CSN2P05814 226 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 WNT2P09544 360 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 GSTT2BP0CG30 244 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 CT45A10P0DMU9 189 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 ERP29P30040 261 aaKnown RBP2.8□□□□□ -1.96
UBR3-209ENST00000477461 IL2RGP31785 369 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 GLP1RP43220 463 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 KIR2DS4P43632 304 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 ARPC4P59998 168 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 ACTBP60709 375 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 RPL31P62899 125 aaKnown RBP2.8□□□□□ -1.96
UBR3-209ENST00000477461 ACTG1P63261 375 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 MEF2CQ06413 473 aaPredicted RBP2.8□□□□□ -1.96
UBR3-209ENST00000477461 AESQ08117 197 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 KIR2DS1Q14954 304 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 CHRFAM7AQ494W8 412 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 C6orf183Q5T699 404 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 HACD4Q5VWC8 232 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 TRIQKQ629K1 86 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 BTNL3Q6UXE8 466 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 ADAMTSL5Q6ZMM2 481 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 MOB1BQ7L9L4 216 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 ZNF565Q8N9K5 539 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 OR4S1Q8NGB4 309 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 OR4K15Q8NH41 348 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 CLDND2Q8NHS1 167 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 PLPPR1Q8TBJ4 325 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 LHX4Q969G2 390 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 FOXC2Q99958 501 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 SULT4A1Q9BR01 284 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 FAAP24Q9BTP7 215 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 REG4Q9BYZ8 158 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 AUNIPQ9H7T9 357 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 ZNF286AQ9HBT8 521 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 C12orf4Q9NQ89 552 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 AK3Q9UIJ7 227 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 KIF25Q9UIL4 384 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 ZNF222Q9UK12 451 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 MAB21L2Q9Y586 359 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 WNK2Q9Y3S1 2297 aa2.8□□□□□ -1.96
UBR3-209ENST00000477461 CFAP47Q6ZTR5 3102 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 FLNCQ14315 2725 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ANKRD17O75179 2603 aaKnown RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 MALRD1Q5VYJ5 2156 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 PPIAL4CA0A0B4J2A2 164 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 A0A0G2JMP0 313 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 TRBV7-9A0A0J9YWB2 115 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 A0A0X1KG70 313 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 A0A1B0GW55 424 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ODAMA1E959 279 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 MEIS3P1A6NDR6 274 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 MFSD2BA6NFX1 497 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ZNF729A6NN14 1252 aaPredicted RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 B4DSR2 109 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 GABARAPH6UMI1 98 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ENSAO43768 121 aaKnown RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 KALRNO60229 2985 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ZNF737O75373 536 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 NAPSAO96009 420 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 HLA-DQB1P01920 261 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 MT-ND4P03905 459 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 IFNA6P05013 189 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 CTXN2P0C2S0 81 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 DUX4L2P0CJ85 424 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 DUX4L3P0CJ86 424 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 DUX4L5P0CJ88 424 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 DUX4L6P0CJ89 424 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 DUX4L7P0CJ90 424 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 PPIAL4GP0DN37 164 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 PTHLHP12272 177 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 GZMHP20718 246 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 DTYMKP23919 212 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 CD40LGP29965 261 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 RCVRNP35243 200 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 FAUP35544 74 aaKnown RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 ETV6P41212 452 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ARHGDIBP52566 201 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 TAS2R46P59540 309 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 AP3S2P59780 193 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 HLA-DRB3P79483 266 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 CXCL6P80162 114 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 LCN2P80188 198 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 SSBP1Q04837 148 aaKnown RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 LOXL1Q08397 574 aaPredicted RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 ACTBL2Q562R1 376 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 ZNF57Q68EA5 555 aaPredicted RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 CYB5R2Q6BCY4 276 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 C16orf87Q6PH81 154 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 DUX4L9Q6RFH8 374 aaPredicted RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 DNM1P46Q6ZS02 220 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 BIVMQ86UB2 503 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 TMEM17Q86X19 198 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 Q8N402 240 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 TOMM5Q8N4H5 51 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 TPRX1Q8N7U7 411 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 GDPD1Q8N9F7 314 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 OR4M2Q8NGB6 313 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 OR5H2Q8NGV7 314 aa2.79□□□□□ -1.96
UBR3-209ENST00000477461 MRPL30Q8TCC3 161 aaKnown RBP2.79□□□□□ -1.96
UBR3-209ENST00000477461 GPX8Q8TED1 209 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms