RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 CLINT1Q14677 625 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 PSG5Q15238 335 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 TUSC1Q2TAM9 212 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 SPINK9Q5DT21 86 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 FAM74A1Q5RGS3 127 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 THNSL2Q86YJ6 484 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 TMEM217Q8N7C4 229 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 TEX45Q8NA69 505 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 TMED6Q8WW62 240 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 PINX1Q96BK5 328 aaKnown RBP7.55□□□□□ -1.2
VPS52-216ENST00000471309 RBMXL1Q96E39 390 aaKnown RBP7.55□□□□□ -1.2
VPS52-216ENST00000471309 COMMD5Q9GZQ3 224 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 HEYLQ9NQ87 328 aaPredicted RBP7.55□□□□□ -1.2
VPS52-216ENST00000471309 HILPDAQ9Y5L2 63 aa7.55□□□□□ -1.2
VPS52-216ENST00000471309 DOPEY2Q9Y3R5 2298 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 TRAV20A0A0B4J274 112 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 TEX50A0A1B0GTY4 177 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 LINC00862A6NCI5 91 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 C15orf62A8K5M9 175 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 B4DSR2 109 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 SLC25A17O43808 307 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 CRYGBP07316 175 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 SPP1P10451 314 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 GATA3P23771 443 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 ATP5IP56385 69 aaPredicted RBP7.54□□□□□ -1.2
VPS52-216ENST00000471309 LGALS4P56470 323 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 LOXL1Q08397 574 aaPredicted RBP7.54□□□□□ -1.2
VPS52-216ENST00000471309 ARL16Q0P5N6 197 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 ATP6V1FQ16864 119 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 DMRTA1Q5VZB9 504 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 PDZD9Q8IXQ8 264 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 MMD2Q8IY49 270 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 LILRB2Q8N423 598 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 SLC24A4Q8NFF2 622 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 OR10P1Q8NGE3 313 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 RNF141Q8WVD5 230 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 MALSU1Q96EH3 234 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 RITA1Q96K30 269 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 PARD6GQ9BYG4 376 aaPredicted RBP7.54□□□□□ -1.2
VPS52-216ENST00000471309 ZNF430Q9H8G1 570 aaPredicted RBP7.54□□□□□ -1.2
VPS52-216ENST00000471309 PLEKHA3Q9HB20 300 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 ENY2Q9NPA8 101 aa7.54□□□□□ -1.2
VPS52-216ENST00000471309 LRBAP50851 2863 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 CENPVL3A0A0U1RRI6 287 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 A0A1W2PN81 502 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 A0A1W2PRD5 423 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 A0A1W2PRF3 423 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 A0A1W2PRM7 423 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 NPFFO15130 113 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 FGF16O43320 207 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 MOSP00540 346 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 IFNA10P01566 189 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 IFNA5P01569 189 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 OR8U8P0C7N1 319 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 MYOD1P15172 320 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 MAS1LP35410 378 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 SAA4P35542 130 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 CHRNA7P36544 502 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 F2RL1P55085 397 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 RAB11AP62491 216 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 EBI3Q14213 229 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 SSX2Q16385 188 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 PRSS8Q16651 343 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 MRGPRG-AS1Q2M3A8 158 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 VWC2Q2TAL6 325 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 BSXQ3C1V8 233 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 OR8G2PQ6IF36 304 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 PRSS57Q6UWY2 283 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 SLC7A5P1Q8MH63 180 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 HSD17B11Q8NBQ5 300 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 OR1L8Q8NGR8 309 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 OR2T10Q8NGZ9 312 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 GNPNAT1Q96EK6 184 aaPredicted RBP7.53□□□□□ -1.2
VPS52-216ENST00000471309 AJUBAQ96IF1 538 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 TMEM147Q9BVK8 224 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 TPSG1Q9NRR2 321 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 NDUFA4L2Q9NRX3 87 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 MED9Q9NWA0 146 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 METTL1Q9UBP6 276 aaKnown RBP7.53□□□□□ -1.2
VPS52-216ENST00000471309 SIGLEC9Q9Y336 463 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 AUP1Q9Y679 476 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 TEX15Q9BXT5 2789 aa7.53□□□□□ -1.2
VPS52-216ENST00000471309 LRRK2Q5S007 2527 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 IGHV1-69DA0A0B4J2H0 117 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 PRSS46E5RG02 174 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 RRHO14718 337 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 NBR2O15453 112 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 FBXO24O75426 580 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 NDUFA3O95167 84 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 IGKV1D-33P01593 117 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 IGKV1-33P01594 117 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 IGHV1-69P01742 117 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 SNRNP70P08621 437 aaKnown RBP7.52□□□□□ -1.21
VPS52-216ENST00000471309 FAM157CP0CG43 387 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 NPY1RP25929 384 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 CNTFRP26992 372 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 ATP6V0CP27449 155 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 SULT1A2P50226 295 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 MMDQ15546 238 aa7.52□□□□□ -1.21
VPS52-216ENST00000471309 Q5PR19 223 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms