RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MEF2DQ14814 521 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 SCGB2B2Q4G0G5 96 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 ZNF585BQ52M93 769 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 OR4C16Q8NGL9 310 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 FYTTD1Q96QD9 318 aaKnown RBP9.97□□□□□ -0.81
COL5A1-206ENST00000465877 FAM212BQ9NTI7 297 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-206ENST00000465877 AURKAIP1Q9NWT8 199 aaPredicted RBP9.97□□□□□ -0.81
COL5A1-206ENST00000465877 ZNF257Q9Y2Q1 563 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 V9GYH0 126 aa9.97□□□□□ -0.81
COL5A1-206ENST00000465877 A0A0G2JLM5 398 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 ANKRD20A5PA0PJZ0 165 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 FABP12A6NFH5 140 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 NPIPB5A8MRT5 1133 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 UPK2O00526 184 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 RBMXL2O75526 392 aaKnown RBP9.96□□□□□ -0.82
COL5A1-206ENST00000465877 PRH1P02810 166 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 IL6RP08887 468 aaPredicted RBP9.96□□□□□ -0.82
COL5A1-206ENST00000465877 FGF2P09038 288 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 PI3P19957 117 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 S100A5P33763 92 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 G6PCP35575 357 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 LPAR6P43657 344 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 SLURP1P55000 103 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 PIGPP57054 158 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 RND3P61587 244 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 ZNF45Q02386 682 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 C19orf35Q6ZS72 473 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 REC114Q7Z4M0 266 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 OR13C8Q8NGS7 320 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 MRGPRFQ96AM1 343 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 SOSTQ9BQB4 213 aa9.96□□□□□ -0.82
COL5A1-206ENST00000465877 DPPA5A6NC42 116 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 CGB1A6NKQ9 187 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 FAM223BA6NKX1 122 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 SEC14L6B5MCN3 397 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 DISC1C4P0D8 188 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 H0Y980 276 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 KRASP01116 189 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 AREGP15514 252 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 ECI1P42126 302 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 OR2B8PP59922 312 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 RHOGP84095 191 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 EGFEM1PQ0D2K5 195 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 EXOSC2Q13868 293 aaKnown RBP9.95□□□□□ -0.82
COL5A1-206ENST00000465877 ZNF79Q15937 498 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 C9orf66Q5T8R8 295 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 SLC25A42Q86VD7 318 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 FAM223AQ8IWN6 122 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 TTC9CQ8N5M4 171 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 MARCH1Q8TCQ1 289 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 TRIM63Q969Q1 353 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 COMMD5Q9GZQ3 224 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 AKIP1Q9NQ31 210 aa9.95□□□□□ -0.82
COL5A1-206ENST00000465877 TRBV9A0A0B4J1U6 114 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 OVOL1O14753 267 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 IGKV1-39P01597 117 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 IGKV1D-39P04432 117 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 HSPB1P04792 205 aaKnown RBP9.94□□□□□ -0.82
COL5A1-206ENST00000465877 PTBP1P26599 531 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL5A1-206ENST00000465877 THOC7Q6I9Y2 204 aaKnown RBP9.94□□□□□ -0.82
COL5A1-206ENST00000465877 CCDC71LQ8N9Z2 235 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 TERB2Q8NHR7 220 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 ZFAND1Q8TCF1 268 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 DCUN1D4Q92564 292 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 USMG5Q96IX5 58 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 PRRT1Q99946 306 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 QTRT1Q9BXR0 403 aaKnown RBP9.94□□□□□ -0.82
COL5A1-206ENST00000465877 COPZ2Q9P299 210 aa9.94□□□□□ -0.82
COL5A1-206ENST00000465877 IGLC7A0M8Q6 106 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 C15orf61A6NNL5 157 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 OR2J3O76001 311 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 REG1AP05451 166 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 CRYGCP07315 174 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 CTSDP07339 412 aaPredicted RBP9.93□□□□□ -0.82
COL5A1-206ENST00000465877 CTRB1P17538 263 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 PSMB6P28072 239 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 KRTAP10-11P60412 298 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 CTRB2Q6GPI1 263 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 ZNF343Q6P1L6 599 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 CCDC190Q86UF4 302 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 CADM3Q8N126 398 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 OR51S1Q8NGJ8 323 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 DLX4Q92988 240 aaPredicted RBP9.93□□□□□ -0.82
COL5A1-206ENST00000465877 SEC22AQ96IW7 307 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 TP53RKQ96S44 253 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 RANGRFQ9HD47 186 aaPredicted RBP9.93□□□□□ -0.82
COL5A1-206ENST00000465877 SLC2A8Q9NY64 477 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 C14orf166Q9Y224 244 aaKnown RBP9.93□□□□□ -0.82
COL5A1-206ENST00000465877 NSG2Q9Y328 171 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 DNAH9Q9NYC9 4486 aa9.93□□□□□ -0.82
COL5A1-206ENST00000465877 C3orf85A0A1B0GTC6 90 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 ANKRD34BA5PLL1 514 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 SNAPC5O75971 98 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 DHFRP00374 187 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 TRBV12-3P01733 135 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 SERPINE2P07093 398 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 AKR1C2P52895 323 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 SURF2Q15527 256 aaPredicted RBP9.92□□□□□ -0.82
COL5A1-206ENST00000465877 C15orf32Q32M92 178 aa9.92□□□□□ -0.82
COL5A1-206ENST00000465877 PYDC2Q56P42 97 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms